recc2828c_e7.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTCCCACTGACACCTCATCCAAGTGAGGGAAGCAAAAGCCAAGCCATTTGGTCTCCACT GCCACTGCTGCCAGTTTCCTCTGCAGACCTGCAGGTGTCCTGACCTCCCCCAGGCCCAGA GCCAGCCCCCAGAGAGCCAGTGCAGACCAGCCCAGGGAAGTTCCCCACCAAGCAGAGCCT CGGCTGGGGAGCACATTCCTCGAAGAACCTGCCGCCATGGAGCCAGGGCCTGGTCTCCAG GGAACAAGAGGGAGCCACTCCAAAGGGCACTCCTCAGCCTTGTCCTGTCAGGACTTCCTC CCTGTCCCACGCTGGGCTGCTGGGCCAGGCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTCCCACTGACACCTCATCCAAGTGAGGGAAGCAAAAGCCAAGCCATTTGGTCTCCACT GCCACTGCTGCCAGTTTCCTCTGCAGACCTGCAGGTGTCCTGACCTCCCCCAGGCCCAGA GCCAGCCCCCAGAGAGCCAGTGCAGACCAGCCCAGGGAAGTTCCCCACCAAGCAGAGCCT CGGCTGGGGAGCACATTCCTCGAAGAACCTGCCGCCATGGAGCCAGGGCCTGGTCTCCAG GGAACAAGAGGGAGCCACTCCAAAGGGCACTCCTCAGCCTTGTCCTGTCAGGACTTCCTC CCTGTCCCACGCTGGGCTGCTGGGCCAGGCCC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 158-332, - strand, RNAz p=0.888462 | |
| 219-332, - strand, RNAz p=0.803818 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 158-332, - strand, RNAz p=0.888462 | |
| 219-332, - strand, RNAz p=0.803818 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-109, gnl|bosTau2|chr10 (60326477-60326583) | |
| 3-109, gnl|canFam2|chr8 (50056741-50057037) | |
| 3-109, gnl|dasNov1|scaffold_1591 (94082-94371) | |
| 3-109, gnl|echTel1|scaffold_166771 (2405-2674) | |
| 3-109, gnl|hg17|chr14 (73298466-73298762) | |
| 3-109, gnl|Hg17|chr14 (73298485-73298592) | |
| 3-109, gnl|loxAfr1|scaffold_229014 (1031-704) | |
| 3-109, gnl|mm7|chr12 (82191580-82191865) | |
| 3-109, gnl|Mm7|chr12 (82191597-82191705) | |
| 3-109, gnl|oryCun1|scaffold_213908 (35565-35288) | |
| 3-109, gnl|panTro1|chr15 (73079735-73080031) | |
| 3-109, gnl|rheMac2|chr7 (136853594-136853890) | |
| 3-109, gnl|rn3|chr6 (108250394-108250662) | |
| 114-332, gnl|bosTau2|chr10 (60326619-60326834) | |
| 114-332, gnl|canFam2|chr8 (50056741-50057037) | |
| 114-332, gnl|dasNov1|scaffold_1591 (94082-94371) | |
| 114-332, gnl|echTel1|scaffold_166771 (2405-2674) | |
| 114-332, gnl|hg17|chr14 (73298466-73298762) | |
| 114-332, gnl|loxAfr1|scaffold_229014 (1031-704) | |
| 114-332, gnl|mm7|chr12 (82191580-82191865) | |
| 114-332, gnl|Mm7|chr12 (82191739-82191946) | |
| 114-332, gnl|oryCun1|scaffold_213908 (35565-35288) | |
| 114-332, gnl|panTro1|chr15 (73079735-73080031) | |
| 114-332, gnl|rheMac2|chr7 (136853594-136853890) | |
| 114-332, gnl|rn3|chr6 (108250394-108250662) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-109, gnl|bosTau2|chr10 (60326477-60326583) | |
| 3-109, gnl|canFam2|chr8 (50056741-50057037) | |
| 3-109, gnl|dasNov1|scaffold_1591 (94082-94371) | |
| 3-109, gnl|echTel1|scaffold_166771 (2405-2674) | |
| 3-109, gnl|hg17|chr14 (73298466-73298762) | |
| 3-109, gnl|Hg17|chr14 (73298485-73298592) | |
| 3-109, gnl|loxAfr1|scaffold_229014 (1031-704) | |
| 3-109, gnl|mm7|chr12 (82191580-82191865) | |
| 3-109, gnl|Mm7|chr12 (82191597-82191705) | |
| 3-109, gnl|oryCun1|scaffold_213908 (35565-35288) | |
| 3-109, gnl|panTro1|chr15 (73079735-73080031) | |
| 3-109, gnl|rheMac2|chr7 (136853594-136853890) | |
| 3-109, gnl|rn3|chr6 (108250394-108250662) | |
| 114-332, gnl|bosTau2|chr10 (60326619-60326834) | |
| 114-332, gnl|canFam2|chr8 (50056741-50057037) | |
| 114-332, gnl|dasNov1|scaffold_1591 (94082-94371) | |
| 114-332, gnl|echTel1|scaffold_166771 (2405-2674) | |
| 114-332, gnl|hg17|chr14 (73298466-73298762) | |
| 114-332, gnl|loxAfr1|scaffold_229014 (1031-704) | |
| 114-332, gnl|mm7|chr12 (82191580-82191865) | |
| 114-332, gnl|Mm7|chr12 (82191739-82191946) | |
| 114-332, gnl|oryCun1|scaffold_213908 (35565-35288) | |
| 114-332, gnl|panTro1|chr15 (73079735-73080031) | |
| 114-332, gnl|rheMac2|chr7 (136853594-136853890) | |
| 114-332, gnl|rn3|chr6 (108250394-108250662) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.115035) |