Non-Coding RNA Search

recc2830c_f1.y1

Sequence:


               
               ATAAAATTTTTGCAAACTTTCATATGTTTAATTTCTGATGTTCTTCATTTGAAGCAATAT
CTTAAAATCAATGACATAAGAAGTCATTTATGCAGGAGGTAGCAGTATAACAAGGGCACA
AAGCAATGATAATAAATCACATTCTTTTAAATAAATTACGTTTTACCTTTTTTAAAAGGA
TGTAATCCTTTGATGCTGAATTTGGTATTTCTATCTAATTTTGCTTTTAGTTGTCTAACC
CATCTTTGCAGCCTTTAAAAATACTTCAGGACATTTGAAGGAAACTGAATATTGCCAATG
GGAGACAGCAGTCTTTTCTTCAGGTTCCCCAGAACAATTTGAACTAAAAAAAACCTGAAA
AATAGGTTTTTCTTTCCTTTAATCCTTTTCTTTCTTATTGCATTTCAATTCACTGATCTG
CTCCATTTTTTTTTTCTTTTTTTTATGGgtctttatgccttttccagggccgcttctgca
gcatatggaggttcccaggctaggggtctaatcagagctgtagctgctggccttcgccag
agccacagcaatgcaggatccgagcc

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAAATTTTTGCAAACTTTCATATGTTTAATTTCTGATGTTCTTCATTTGAAGCAATAT
CTTAAAATCAATGACATAAGAAGTCATTTATGCAGGAGGTAGCAGTATAACAAGGGCACA
AAGCAATGATAATAAATCACATTCTTTTAAATAAATTACGTTTTACCTTTTTTAAAAGGA
TGTAATCCTTTGATGCTGAATTTGGTATTTCTATCTAATTTTGCTTTTAGTTGTCTAACC
CATCTTTGCAGCCTTTAAAAATACTTCAGGACATTTGAAGGAAACTGAATATTGCCAATG
GGAGACAGCAGTCTTTTCTTCAGGTTCCCCAGAACAATTTGAACTAAAAAAAACCTGAAA
AATAGGTTTTTCTTTCCTTTAATCCTTTTCTTTCTTATTGCATTTCAATTCACTGATCTG
CTCCATTTTTTTTTTCTTTTTTTTATGGgtctttatgccttttccagggccgcttctgca
gcatatggaggttcccaggctaggggtctaatcagagctgtagctgctggccttcgccag
agccacagcaatgcaggatccgagcc

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-431, gnl|bosTau2|chr27 (28965700-28965252)
               

               
               1-431, gnl|Hg17|chr2 (162556183-162556638)
               

               
               1-431, gnl|Mm7|chr2 (62175149-62175562)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-431, gnl|bosTau2|chr27 (28965700-28965252)
               

               
               1-431, gnl|Hg17|chr2 (162556183-162556638)
               

               
               1-431, gnl|Mm7|chr2 (62175149-62175562)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-431, gnl\|bosTau2\|chr27 (28965700-28965252)
	1-431, gnl\|Hg17\|chr2 (162556183-162556638)
	1-431, gnl\|Mm7\|chr2 (62175149-62175562)