Non-Coding RNA Search

recc2833c_e7.y1

Sequence:


               
               AGAAGTTTGGTATTTATGTCCTGTGTTGTCTTCCATTTCTGCTCTATTTTCCCAGAAGAG
AGAGAATGGGGACAAACATGAAGTTGGTCCCCTAACATCTGTTGAAGTCAAGACTGGGTA
TTTAGTTAGCAGTGTGTTCTTTGATGGAAGCATCTGGGAAAGCTGGATTTAGGTCTAGCT
AGTATGTGTTTAATAAAGATAAAAGTTACATGGTATTTAAAAATCTGAAATGTCACCATG
GCATCCTAATAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGTTTGGTATTTATGTCCTGTGTTGTCTTCCATTTCTGCTCTATTTTCCCAGAAGAG
AGAGAATGGGGACAAACATGAAGTTGGTCCCCTAACATCTGTTGAAGTCAAGACTGGGTA
TTTAGTTAGCAGTGTGTTCTTTGATGGAAGCATCTGGGAAAGCTGGATTTAGGTCTAGCT
AGTATGTGTTTAATAAAGATAAAAGTTACATGGTATTTAAAAATCTGAAATGTCACCATG
GCATCCTAATAGT

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               1-252, gnl|bosTau2|chr26 (25634462-25634712)
               

               
               1-252, gnl|canFam2|chr28 (32748530-32748958)
               

               
               1-252, gnl|hg17|chr10 (121343703-121344116)
               

               
               1-252, gnl|Hg17|chr10 (121344512-121343969)
               

               
               1-252, gnl|mm7|chr7 (124555849-124556215)
               

               
               1-252, gnl|monDom2|scaffold_14 (40629766-40629336)
               

               
               1-252, gnl|oryCun1|scaffold_134139 (4122-3744)
               

               
               1-252, gnl|panTro1|chr8 (123612805-123613220)
               

               
               1-252, gnl|rheMac2|chr9 (119215179-119215599)
               

               
               1-252, gnl|rn3|chr1 (187853747-187854152)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-252, gnl|bosTau2|chr26 (25634462-25634712)
               

               
               1-252, gnl|canFam2|chr28 (32748530-32748958)
               

               
               1-252, gnl|hg17|chr10 (121343703-121344116)
               

               
               1-252, gnl|Hg17|chr10 (121344512-121343969)
               

               
               1-252, gnl|mm7|chr7 (124555849-124556215)
               

               
               1-252, gnl|monDom2|scaffold_14 (40629766-40629336)
               

               
               1-252, gnl|oryCun1|scaffold_134139 (4122-3744)
               

               
               1-252, gnl|panTro1|chr8 (123612805-123613220)
               

               
               1-252, gnl|rheMac2|chr9 (119215179-119215599)
               

               
               1-252, gnl|rn3|chr1 (187853747-187854152)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-252, gnl\|bosTau2\|chr26 (25634462-25634712)
	1-252, gnl\|canFam2\|chr28 (32748530-32748958)
	1-252, gnl\|hg17\|chr10 (121343703-121344116)
	1-252, gnl\|Hg17\|chr10 (121344512-121343969)
	1-252, gnl\|mm7\|chr7 (124555849-124556215)
	1-252, gnl\|monDom2\|scaffold_14 (40629766-40629336)
	1-252, gnl\|oryCun1\|scaffold_134139 (4122-3744)
	1-252, gnl\|panTro1\|chr8 (123612805-123613220)
	1-252, gnl\|rheMac2\|chr9 (119215179-119215599)
	1-252, gnl\|rn3\|chr1 (187853747-187854152)