Non-Coding RNA Search

recc2834c_h8.y1

Sequence:


               
               GTGAAACAGACCTTACGTGAATTTATTCTAAAAGCATTTTCCAAAAAGCCTGAGATTTCC
AAAGAGATAAGACGAGCAGAAGATCTCAATTATAAGAGAGAAAACTATATCTCTAACCGC
ACACTTGCTGAAATGAGCAAGGATCACAATTTCCACAAAGAAAAAGATAAAACCAGTGGT
TTGGGGAACAGTGTGGACAAATACTTGATGGAAGAAAGTGATTGTCAATCATTTATTCAC
AATCCCAGCCTCACAGTGACAGTGCCAATGGCACCTGGGGAATCTGATTGGGAAATTATG
AATACTGAGGAACTTAGCAGTGATTCAGATAGTGAATACAGCAAAGGGAGGCTGAACCGA
TCGAGTTCTTCCGAGTGCAGCACCATTGATAACCCTTGGCCAGGAGAAGGAGAAGAAGCA
GAAGCTGAGCCTGTAAATTCAGATGAGCCAGAGGCCTGTTTTACAGATGGTTGTGTACGG
AGGTTCCCATGCTGCCAAGTGAACATAGAATCAGGGAGAGGAAAAATCTGGTGGAATATC
AGGAAAACCTGCTACAGGATCGTTGAGCACAGTGGGTTTGAAAGCTTCATGGTTCTCATG
ATCCTGCTCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAAACAGACCTTACGTGAATTTATTCTAAAAGCATTTTCCAAAAAGCCTGAGATTTCC
AAAGAGATAAGACGAGCAGAAGATCTCAATTATAAGAGAGAAAACTATATCTCTAACCGC
ACACTTGCTGAAATGAGCAAGGATCACAATTTCCACAAAGAAAAAGATAAAACCAGTGGT
TTGGGGAACAGTGTGGACAAATACTTGATGGAAGAAAGTGATTGTCAATCATTTATTCAC
AATCCCAGCCTCACAGTGACAGTGCCAATGGCACCTGGGGAATCTGATTGGGAAATTATG
AATACTGAGGAACTTAGCAGTGATTCAGATAGTGAATACAGCAAAGGGAGGCTGAACCGA
TCGAGTTCTTCCGAGTGCAGCACCATTGATAACCCTTGGCCAGGAGAAGGAGAAGAAGCA
GAAGCTGAGCCTGTAAATTCAGATGAGCCAGAGGCCTGTTTTACAGATGGTTGTGTACGG
AGGTTCCCATGCTGCCAAGTGAACATAGAATCAGGGAGAGGAAAAATCTGGTGGAATATC
AGGAAAACCTGCTACAGGATCGTTGAGCACAGTGGGTTTGAAAGCTTCATGGTTCTCATG
ATCCTGCTCAGC

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-348, gnl|bosTau2|chr2 (22765592-22765939)
               

               
               1-348, gnl|Hg17|chr2 (166954763-166954416)
               

               
               1-348, gnl|Mm7|chr2 (66457504-66457157)
               


               
               469-612, gnl|bosTau2|chr2 (22792260-22792403)
               

               
               469-612, gnl|Hg17|chr2 (166924674-166924531)
               

               
               469-612, gnl|Mm7|chr2 (66439224-66439081)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-348, gnl|bosTau2|chr2 (22765592-22765939)
               

               
               1-348, gnl|Hg17|chr2 (166954763-166954416)
               

               
               1-348, gnl|Mm7|chr2 (66457504-66457157)
               


               
               469-612, gnl|bosTau2|chr2 (22792260-22792403)
               

               
               469-612, gnl|Hg17|chr2 (166924674-166924531)
               

               
               469-612, gnl|Mm7|chr2 (66439224-66439081)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-348, gnl\|bosTau2\|chr2 (22765592-22765939)
	1-348, gnl\|Hg17\|chr2 (166954763-166954416)
	1-348, gnl\|Mm7\|chr2 (66457504-66457157)

	469-612, gnl\|bosTau2\|chr2 (22792260-22792403)
	469-612, gnl\|Hg17\|chr2 (166924674-166924531)
	469-612, gnl\|Mm7\|chr2 (66439224-66439081)