Non-Coding RNA Search

rece01c_l23.y1

Sequence:


               
               GGCACACCCTGTCGGTTTAGGAACCTTCACGTTGTGGCCCCGGGCTTCAATTAAATTAAA
CAAGACAGAACCTCCAGTACAAGGTTGAATAGAAATGGTAAGACCAAACATTCTTGCCTT
GTTCCTGACCTGGGGGGGGAAAACAGCCAGCTTTCACCAGGGAATGTACTGTTTCCCAGC
ACGAGAAGTTCTGCCCGGGGACCACGGCAAGGTTGATTCATTCAAGGGCTCAGAACTCTG
CCATCTTCAGTGTGTCACCCCTGTCCTCAGAGTTGTAAGGAACTACTTCATTTCCAGCCA
TCACATCTGGACCCAATAAATGACTAAGGGCAGAAAAAGGAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCACACCCTGTCGGTTTAGGAACCTTCACGTTGTGGCCCCGGGCTTCAATTAAATTAAA
CAAGACAGAACCTCCAGTACAAGGTTGAATAGAAATGGTAAGACCAAACATTCTTGCCTT
GTTCCTGACCTGGGGGGGGAAAACAGCCAGCTTTCACCAGGGAATGTACTGTTTCCCAGC
ACGAGAAGTTCTGCCCGGGGACCACGGCAAGGTTGATTCATTCAAGGGCTCAGAACTCTG
CCATCTTCAGTGTGTCACCCCTGTCCTCAGAGTTGTAAGGAACTACTTCATTTCCAGCCA
TCACATCTGGACCCAATAAATGACTAAGGGCAGAAAAAGGAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               161-341, gnl|bosTau2|chr15 (34279247-34279429)
               

               
               161-341, gnl|hg17|chr11 (73804482-73804703)
               

               
               161-341, gnl|loxAfr1|scaffold_103816 (1572-1304)
               

               
               161-341, gnl|mm7|chr7 (96265061-96264799)
               

               
               161-341, gnl|Mm7|chr7 (96265003-96264835)
               

               
               161-341, gnl|oryCun1|scaffold_213188 (82552-82910)
               

               
               161-341, gnl|panTro1|chr9 (75089419-75089640)
               

               
               161-341, gnl|rheMac2|chr14 (72588256-72588472)
               

               
               161-341, gnl|rn3|chr1 (157673615-157673355)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-341, gnl|bosTau2|chr15 (34279247-34279429)
               

               
               161-341, gnl|hg17|chr11 (73804482-73804703)
               

               
               161-341, gnl|loxAfr1|scaffold_103816 (1572-1304)
               

               
               161-341, gnl|mm7|chr7 (96265061-96264799)
               

               
               161-341, gnl|Mm7|chr7 (96265003-96264835)
               

               
               161-341, gnl|oryCun1|scaffold_213188 (82552-82910)
               

               
               161-341, gnl|panTro1|chr9 (75089419-75089640)
               

               
               161-341, gnl|rheMac2|chr14 (72588256-72588472)
               

               
               161-341, gnl|rn3|chr1 (157673615-157673355)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	161-341, gnl\|bosTau2\|chr15 (34279247-34279429)
	161-341, gnl\|hg17\|chr11 (73804482-73804703)
	161-341, gnl\|loxAfr1\|scaffold_103816 (1572-1304)
	161-341, gnl\|mm7\|chr7 (96265061-96264799)
	161-341, gnl\|Mm7\|chr7 (96265003-96264835)
	161-341, gnl\|oryCun1\|scaffold_213188 (82552-82910)
	161-341, gnl\|panTro1\|chr9 (75089419-75089640)
	161-341, gnl\|rheMac2\|chr14 (72588256-72588472)
	161-341, gnl\|rn3\|chr1 (157673615-157673355)