rece04c_d23.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGATCCACTAGGGCGGCCGCGGTTGGGCGGCGCTGAGCATCTGAGTGACTGGCTCCTGCC TCCATCCCGGGGAAGCCCAGGACACCAGGCAATGATGGCAGCGTTGCATCTGTCTGCCCC TCAGGCTGAGGTGACCTTCGAGGACGTGGCTGTGCTTCTCTCCCGGGAGGAGTGGGGCCG TCTGGGCCCTGCTCAGAAAGGCCTCTACAGGGATGTGATGCTGGAAACCTACAGGAACCT GGTCTCGCTGGGAGCTGGACATGCAGGTCCCAAGCCTGGAGTGATCGCACAGTTGGAGCG AGGGGATGAGCCGTGGGTCCTGGACATGCAGGGGAGAGAGCAATCGACCATTGATGGCTC AGCTCATAGCACCAGCACTGAGCACCAGGAGTTGACTTCAGGGGAGATGTTTGATGGGAC AGAACTGGACCAACCCAGAGGGACTGTTCTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGATCCACTAGGGCGGCCGCGGTTGGGCGGCGCTGAGCATCTGAGTGACTGGCTCCTGCC TCCATCCCGGGGAAGCCCAGGACACCAGGCAATGATGGCAGCGTTGCATCTGTCTGCCCC TCAGGCTGAGGTGACCTTCGAGGACGTGGCTGTGCTTCTCTCCCGGGAGGAGTGGGGCCG TCTGGGCCCTGCTCAGAAAGGCCTCTACAGGGATGTGATGCTGGAAACCTACAGGAACCT GGTCTCGCTGGGAGCTGGACATGCAGGTCCCAAGCCTGGAGTGATCGCACAGTTGGAGCG AGGGGATGAGCCGTGGGTCCTGGACATGCAGGGGAGAGAGCAATCGACCATTGATGGCTC AGCTCATAGCACCAGCACTGAGCACCAGGAGTTGACTTCAGGGGAGATGTTTGATGGGAC AGAACTGGACCAACCCAGAGGGACTGTTCTCC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 156-252, - strand, RNAz p=0.909068 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 156-252, - strand, RNAz p=0.909068 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 122-252, gnl|bosTau2|chr14 (3131102-3130972) | |
| 122-252, gnl|canFam2|chr1 (102878491-102878381) | |
| 122-252, gnl|canFam2|chr13 (41121590-41121748) | |
| 122-252, gnl|canFam2|chr13 (41231560-41231704) | |
| 122-252, gnl|dasNov1|scaffold_25209 (12713-12554) | |
| 122-252, gnl|dasNov1|scaffold_54417 (5557-5413) | |
| 122-252, gnl|echTel1|scaffold_179183 (3819-3977) | |
| 122-252, gnl|echTel1|scaffold_317009 (32922-33066) | |
| 122-252, gnl|echTel1|scaffold_45544 (2587-2700) | |
| 122-252, gnl|galGal2|chrUn (125533100-125533258) | |
| 122-252, gnl|galGal2|chrUn (148467083-148467202) | |
| 122-252, gnl|hg17|chr19 (63290081-63290194) | |
| 122-252, gnl|hg17|chr8 (145974217-145974375) | |
| 122-252, gnl|hg17|chr8 (146195789-146195933) | |
| 122-252, gnl|Hg17|chr8 (145974356-145974226) | |
| 122-252, gnl|loxAfr1|scaffold_13772 (22285-22430) | |
| 122-252, gnl|loxAfr1|scaffold_20815 (41685-41829) | |
| 122-252, gnl|loxAfr1|scaffold_9264 (60781-60667) | |
| 122-252, gnl|Mm7|chr15 (76999690-76999560) | |
| 122-252, gnl|mm7|chr17 (20062734-20062853) | |
| 122-252, gnl|mm7|chr7 (123489801-123489932) | |
| 122-252, gnl|mm7|chr7 (11358241-11358351) | |
| 122-252, gnl|monDom2|scaffold_227 (288882-288998) | |
| 122-252, gnl|monDom2|scaffold_79 (4532851-4532703) | |
| 122-252, gnl|oryCun1|scaffold_156446 (5545-5704) | |
| 122-252, gnl|oryCun1|scaffold_156446 (5551-5695) | |
| 122-252, gnl|oryCun1|scaffold_193473 (11130-11017) | |
| 122-252, gnl|panTro1|chr20 (61028187-61028300) | |
| 122-252, gnl|panTro1|chr7 (149273589-149273747) | |
| 122-252, gnl|panTro1|chr7 (149494366-149494510) | |
| 122-252, gnl|rheMac2|chr19 (63846800-63846913) | |
| 122-252, gnl|rheMac2|chr8 (147423608-147423766) | |
| 122-252, gnl|rheMac2|chr8 (147657327-147657471) | |
| 122-252, gnl|rn3|chr1 (186837290-186837421) | |
| 122-252, gnl|rn3|chr1 (73324708-73324818) | |
| 122-252, gnl|rn3|chr5 (66273183-66273064) | |
| 122-252, gnl|xenTro1|scaffold_634 (545196-545339) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 122-252, gnl|bosTau2|chr14 (3131102-3130972) | |
| 122-252, gnl|canFam2|chr1 (102878491-102878381) | |
| 122-252, gnl|canFam2|chr13 (41121590-41121748) | |
| 122-252, gnl|canFam2|chr13 (41231560-41231704) | |
| 122-252, gnl|dasNov1|scaffold_25209 (12713-12554) | |
| 122-252, gnl|dasNov1|scaffold_54417 (5557-5413) | |
| 122-252, gnl|echTel1|scaffold_179183 (3819-3977) | |
| 122-252, gnl|echTel1|scaffold_317009 (32922-33066) | |
| 122-252, gnl|echTel1|scaffold_45544 (2587-2700) | |
| 122-252, gnl|galGal2|chrUn (125533100-125533258) | |
| 122-252, gnl|galGal2|chrUn (148467083-148467202) | |
| 122-252, gnl|hg17|chr19 (63290081-63290194) | |
| 122-252, gnl|hg17|chr8 (145974217-145974375) | |
| 122-252, gnl|hg17|chr8 (146195789-146195933) | |
| 122-252, gnl|Hg17|chr8 (145974356-145974226) | |
| 122-252, gnl|loxAfr1|scaffold_13772 (22285-22430) | |
| 122-252, gnl|loxAfr1|scaffold_20815 (41685-41829) | |
| 122-252, gnl|loxAfr1|scaffold_9264 (60781-60667) | |
| 122-252, gnl|Mm7|chr15 (76999690-76999560) | |
| 122-252, gnl|mm7|chr17 (20062734-20062853) | |
| 122-252, gnl|mm7|chr7 (123489801-123489932) | |
| 122-252, gnl|mm7|chr7 (11358241-11358351) | |
| 122-252, gnl|monDom2|scaffold_227 (288882-288998) | |
| 122-252, gnl|monDom2|scaffold_79 (4532851-4532703) | |
| 122-252, gnl|oryCun1|scaffold_156446 (5545-5704) | |
| 122-252, gnl|oryCun1|scaffold_156446 (5551-5695) | |
| 122-252, gnl|oryCun1|scaffold_193473 (11130-11017) | |
| 122-252, gnl|panTro1|chr20 (61028187-61028300) | |
| 122-252, gnl|panTro1|chr7 (149273589-149273747) | |
| 122-252, gnl|panTro1|chr7 (149494366-149494510) | |
| 122-252, gnl|rheMac2|chr19 (63846800-63846913) | |
| 122-252, gnl|rheMac2|chr8 (147423608-147423766) | |
| 122-252, gnl|rheMac2|chr8 (147657327-147657471) | |
| 122-252, gnl|rn3|chr1 (186837290-186837421) | |
| 122-252, gnl|rn3|chr1 (73324708-73324818) | |
| 122-252, gnl|rn3|chr5 (66273183-66273064) | |
| 122-252, gnl|xenTro1|scaffold_634 (545196-545339) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) |