Non-Coding RNA Search

rece05c_d18.y1

Sequence:


               
               CCCAGATTTATGAAAATTGAGAAAGGTCACTTGGTCTGGTGGGAAGCTGAATCCATGTTT
CAACACTGGGCTCGACACTTGCTACAGTATTGATGGTTTCCTGGGCATGGCCAGGCCCTG
ACCTCTGGAGATAGCGAAATTTCTGGGATTTAGCTTTTTTCACTCTGAATGTGCACCATG
ACGTAAAAGAAAAAGTTTGTGCCTCTAAACTATTGTGACTAATATGTTACATATGTTACT
TTATAATCAAGATATTTTATAATGCTATTCTAAAACAACTTTTTATTTCTTGTCACTACT
TGATGCCAAGCAATTAAAAATTATGTGTAACATTaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAGATTTATGAAAATTGAGAAAGGTCACTTGGTCTGGTGGGAAGCTGAATCCATGTTT
CAACACTGGGCTCGACACTTGCTACAGTATTGATGGTTTCCTGGGCATGGCCAGGCCCTG
ACCTCTGGAGATAGCGAAATTTCTGGGATTTAGCTTTTTTCACTCTGAATGTGCACCATG
ACGTAAAAGAAAAAGTTTGTGCCTCTAAACTATTGTGACTAATATGTTACATATGTTACT
TTATAATCAAGATATTTTATAATGCTATTCTAAAACAACTTTTTATTTCTTGTCACTACT
TGATGCCAAGCAATTAAAAATTATGTGTAACATTaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaa

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

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               3-260, gnl|bosTau2|chr13 (21021015-21020757)
               

               
               3-260, gnl|canFam2|chr2 (19452950-19453249)
               

               
               3-260, gnl|echTel1|scaffold_76122 (486-243)
               

               
               3-260, gnl|hg17|chr10 (30498026-30498266)
               

               
               3-260, gnl|Hg17|chr10 (30498265-30498033)
               

               
               3-260, gnl|loxAfr1|scaffold_27684 (2374-2113)
               

               
               3-260, gnl|panTro1|chr8 (30870913-30871153)
               

               
               3-260, gnl|rheMac2|chr9 (30303869-30304121)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-260, gnl|bosTau2|chr13 (21021015-21020757)
               

               
               3-260, gnl|canFam2|chr2 (19452950-19453249)
               

               
               3-260, gnl|echTel1|scaffold_76122 (486-243)
               

               
               3-260, gnl|hg17|chr10 (30498026-30498266)
               

               
               3-260, gnl|Hg17|chr10 (30498265-30498033)
               

               
               3-260, gnl|loxAfr1|scaffold_27684 (2374-2113)
               

               
               3-260, gnl|panTro1|chr8 (30870913-30871153)
               

               
               3-260, gnl|rheMac2|chr9 (30303869-30304121)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	3-260, gnl\|bosTau2\|chr13 (21021015-21020757)
	3-260, gnl\|canFam2\|chr2 (19452950-19453249)
	3-260, gnl\|echTel1\|scaffold_76122 (486-243)
	3-260, gnl\|hg17\|chr10 (30498026-30498266)
	3-260, gnl\|Hg17\|chr10 (30498265-30498033)
	3-260, gnl\|loxAfr1\|scaffold_27684 (2374-2113)
	3-260, gnl\|panTro1\|chr8 (30870913-30871153)
	3-260, gnl\|rheMac2\|chr9 (30303869-30304121)