Non-Coding RNA Search

rece10_d23.y1

Sequence:


               
               TGGAATTCCAGCTGGCTTATTCAGAGTAACACAATATAGACTTTTGCCCCATGTTTCAAC
CACTGTCACATCTATTGCAGAGCATGCCATGGAAGTTAAAAAATTAAACACATCAGTTTC
TGTTTTAACTAAACTACAGATCTAGTGGCAGAGCAGGCAGAAAGCAATGGAGAGATGTAG
AATTGAGAACTGTAATTATATTCTCGATATACTCCATCACTTTTACAAAAGTAACTGGAG
TTAAGAACCTCTAAGTCTGCCGTATCTTAAAAAAACAAAAGTCAAGATATTTTATAAACA
GACCACTGACTTACTTCTTCTGGGTTTCCACATTCATGTGGCTGCCATGTTTCCAGCTGT
CTCTCCAGCTCCTGTCTTAGCTCACTGACATCTTTCAAGAAAGGCTAAGTGGGAAAAGCC
ACAGATGAGAGGTGACTTAGATTGGAATCACCAACTCATTTCCAGTCGTCTTCTTCCCTG
TAGCACAAACTCCAAATACACAGCCCTGACATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAATTCCAGCTGGCTTATTCAGAGTAACACAATATAGACTTTTGCCCCATGTTTCAAC
CACTGTCACATCTATTGCAGAGCATGCCATGGAAGTTAAAAAATTAAACACATCAGTTTC
TGTTTTAACTAAACTACAGATCTAGTGGCAGAGCAGGCAGAAAGCAATGGAGAGATGTAG
AATTGAGAACTGTAATTATATTCTCGATATACTCCATCACTTTTACAAAAGTAACTGGAG
TTAAGAACCTCTAAGTCTGCCGTATCTTAAAAAAACAAAAGTCAAGATATTTTATAAACA
GACCACTGACTTACTTCTTCTGGGTTTCCACATTCATGTGGCTGCCATGTTTCCAGCTGT
CTCTCCAGCTCCTGTCTTAGCTCACTGACATCTTTCAAGAAAGGCTAAGTGGGAAAAGCC
ACAGATGAGAGGTGACTTAGATTGGAATCACCAACTCATTTCCAGTCGTCTTCTTCCCTG
TAGCACAAACTCCAAATACACAGCCCTGACATG

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               7-158, gnl|bosTau2|chr9 (33360518-33360357)
               

               
               7-158, gnl|Hg17|chr6 (90418299-90418461)
               


               
               222-493, gnl|bosTau2|chr9 (33360117-33359851)
               

               
               222-493, gnl|Hg17|chr6 (90418530-90418831)
               

               
               222-493, gnl|Mm7|chr4 (33045673-33045389)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-158, gnl|bosTau2|chr9 (33360518-33360357)
               

               
               7-158, gnl|Hg17|chr6 (90418299-90418461)
               


               
               222-493, gnl|bosTau2|chr9 (33360117-33359851)
               

               
               222-493, gnl|Hg17|chr6 (90418530-90418831)
               

               
               222-493, gnl|Mm7|chr4 (33045673-33045389)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	7-158, gnl\|bosTau2\|chr9 (33360518-33360357)
	7-158, gnl\|Hg17\|chr6 (90418299-90418461)

	222-493, gnl\|bosTau2\|chr9 (33360117-33359851)
	222-493, gnl\|Hg17\|chr6 (90418530-90418831)
	222-493, gnl\|Mm7\|chr4 (33045673-33045389)