Non-Coding RNA Search

rece16c_h1.y1

Sequence:


               
               GGGGGTGTCCTCCGACAGCCCTTGCGGGGAGCCAAGCTGTGTTCTCATCCCGAGGGGCAG
GGCAGGCGAGACTGCGCTCAGCTCCCTCGACGAACCGGGTTCTGAGAGCAGCCGTGATTG
GGGGGAGGGGGAGCCCTGGTGTAGGGGGGAGGACGCATGCGCAAGCGACAACGCTCCGGA
GCCCCTGCCCAAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGGTGTCCTCCGACAGCCCTTGCGGGGAGCCAAGCTGTGTTCTCATCCCGAGGGGCAG
GGCAGGCGAGACTGCGCTCAGCTCCCTCGACGAACCGGGTTCTGAGAGCAGCCGTGATTG
GGGGGAGGGGGAGCCCTGGTGTAGGGGGGAGGACGCATGCGCAAGCGACAACGCTCCGGA
GCCCCTGCCCAAACC

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               1-195, gnl|bosTau2|chr11 (75877741-75877942)
               

               
               1-195, gnl|canFam2|chr9 (63191768-63191197)
               

               
               1-195, gnl|dasNov1|scaffold_48141 (7426-6861)
               

               
               1-195, gnl|echTel1|scaffold_267596 (34530-35120)
               

               
               1-195, gnl|hg17|chr9 (122782636-122783223)
               

               
               1-195, gnl|Hg17|chr9 (122782979-122783174)
               

               
               1-195, gnl|loxAfr1|scaffold_52528 (217-800)
               

               
               1-195, gnl|mm7|chr2 (37459397-37459925)
               

               
               1-195, gnl|Mm7|chr2 (37459662-37459876)
               

               
               1-195, gnl|monDom2|scaffold_38 (16431606-16432258)
               

               
               1-195, gnl|panTro1|chr11 (107485436-107486023)
               

               
               1-195, gnl|rheMac2|chr15 (12788277-12787691)
               

               
               1-195, gnl|rn3|chr3 (17109363-17109888)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-195, gnl|bosTau2|chr11 (75877741-75877942)
               

               
               1-195, gnl|canFam2|chr9 (63191768-63191197)
               

               
               1-195, gnl|dasNov1|scaffold_48141 (7426-6861)
               

               
               1-195, gnl|echTel1|scaffold_267596 (34530-35120)
               

               
               1-195, gnl|hg17|chr9 (122782636-122783223)
               

               
               1-195, gnl|Hg17|chr9 (122782979-122783174)
               

               
               1-195, gnl|loxAfr1|scaffold_52528 (217-800)
               

               
               1-195, gnl|mm7|chr2 (37459397-37459925)
               

               
               1-195, gnl|Mm7|chr2 (37459662-37459876)
               

               
               1-195, gnl|monDom2|scaffold_38 (16431606-16432258)
               

               
               1-195, gnl|panTro1|chr11 (107485436-107486023)
               

               
               1-195, gnl|rheMac2|chr15 (12788277-12787691)
               

               
               1-195, gnl|rn3|chr3 (17109363-17109888)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	1-195, gnl\|bosTau2\|chr11 (75877741-75877942)
	1-195, gnl\|canFam2\|chr9 (63191768-63191197)
	1-195, gnl\|dasNov1\|scaffold_48141 (7426-6861)
	1-195, gnl\|echTel1\|scaffold_267596 (34530-35120)
	1-195, gnl\|hg17\|chr9 (122782636-122783223)
	1-195, gnl\|Hg17\|chr9 (122782979-122783174)
	1-195, gnl\|loxAfr1\|scaffold_52528 (217-800)
	1-195, gnl\|mm7\|chr2 (37459397-37459925)
	1-195, gnl\|Mm7\|chr2 (37459662-37459876)
	1-195, gnl\|monDom2\|scaffold_38 (16431606-16432258)
	1-195, gnl\|panTro1\|chr11 (107485436-107486023)
	1-195, gnl\|rheMac2\|chr15 (12788277-12787691)
	1-195, gnl\|rn3\|chr3 (17109363-17109888)