rece22c_i20.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTGTGGTCGTAGGACAATGTGGACTGTGTGTGGATAAGAGGGACTGTTCACGTCTGTCT TGGTAGCTGTGTGTTTTTTCCCCTCTGTGTTTGTGTGGCTATTCACTCTGCAAATATTTA CTGGGCACACCGTGAGAAGGTGAGAGTGTGTGTGTGTTTGTGTGTGTGCAAGTGCATGTG TGTGTCACCACCCGGCACATGGACAGGCTCACAGAAGAAGAACGGGCAGCACCCTGCTTG AGCACAGCTGAGCCACTTACCCTGTGGCGGGTCCAGGGCCCACCGGCAGCCGGTGTTGAC CTCTCCCCCTTGAAGGTGCAGGAGAAAGTGGGGCTGGGCAGGGGTCTGCAGCCCTTTCTC AGGGACACACCCTGATAGCACAATCTCCCTGGGGCCCTGCCCGCCTCCAGGCCTCTCCTG CCCCAACCCTGGGGAAGAGAGGGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTGTGGTCGTAGGACAATGTGGACTGTGTGTGGATAAGAGGGACTGTTCACGTCTGTCT TGGTAGCTGTGTGTTTTTTCCCCTCTGTGTTTGTGTGGCTATTCACTCTGCAAATATTTA CTGGGCACACCGTGAGAAGGTGAGAGTGTGTGTGTGTTTGTGTGTGTGCAAGTGCATGTG TGTGTCACCACCCGGCACATGGACAGGCTCACAGAAGAAGAACGGGCAGCACCCTGCTTG AGCACAGCTGAGCCACTTACCCTGTGGCGGGTCCAGGGCCCACCGGCAGCCGGTGTTGAC CTCTCCCCCTTGAAGGTGCAGGAGAAAGTGGGGCTGGGCAGGGGTCTGCAGCCCTTTCTC AGGGACACACCCTGATAGCACAATCTCCCTGGGGCCCTGCCCGCCTCCAGGCCTCTCCTG CCCCAACCCTGGGGAAGAGAGGGGT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 269-431, - strand, RNAz p=0.863586 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 269-431, - strand, RNAz p=0.863586 |
| Aligned organism(s): 9 entry(ies) | More info |
| Aligned organism(s): 9 entry(ies) | Help | Less info |
| 3-134, gnl|bosTau2|chr7 (17738817-17738947) | |
| 3-134, gnl|canFam2|chr20 (59617222-59616484) | |
| 3-134, gnl|hg17|chr19 (2666037-2666810) | |
| 3-134, gnl|Hg17|chr19 (2666237-2666101) | |
| 3-134, gnl|loxAfr1|scaffold_69023 (4417-5170) | |
| 3-134, gnl|panTro1|chr20 (2791975-2792751) | |
| 3-134, gnl|rheMac2|chr19 (2545089-2545918) | |
| 159-431, gnl|bosTau2|chr7 (17738944-17739214) | |
| 159-431, gnl|Hg17|chr19 (2666112-2665811) |
| Aligned organism(s): 9 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-134, gnl|bosTau2|chr7 (17738817-17738947) | |
| 3-134, gnl|canFam2|chr20 (59617222-59616484) | |
| 3-134, gnl|hg17|chr19 (2666037-2666810) | |
| 3-134, gnl|Hg17|chr19 (2666237-2666101) | |
| 3-134, gnl|loxAfr1|scaffold_69023 (4417-5170) | |
| 3-134, gnl|panTro1|chr20 (2791975-2792751) | |
| 3-134, gnl|rheMac2|chr19 (2545089-2545918) | |
| 159-431, gnl|bosTau2|chr7 (17738944-17739214) | |
| 159-431, gnl|Hg17|chr19 (2666112-2665811) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) |