Non-Coding RNA Search

rece27c_e24.y1

Sequence:


               
               TTTTCTTGGGCTATTTTCGCGATTTTAATTTTCCGTTCCCCGTCTCCTCTCTCCCCCCTG
ATTACATTTGGGGTTCTTTTGGGGCTCCTGGAATGAGCCTACATTTTCCTGGTGATATTT
TTTAATAAAAACCATCATTTATGATTATTTTTCTTCCCTCAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCTTGGGCTATTTTCGCGATTTTAATTTTCCGTTCCCCGTCTCCTCTCTCCCCCCTG
ATTACATTTGGGGTTCTTTTGGGGCTCCTGGAATGAGCCTACATTTTCCTGGTGATATTT
TTTAATAAAAACCATCATTTATGATTATTTTTCTTCCCTCAAAAAAAAAAAAAAAAAA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-159, gnl|bosTau2|chr25 (39670968-39670810)
               

               
               1-159, gnl|canFam2|chr6 (18367678-18367405)
               

               
               1-159, gnl|galGal2|chr14 (4823664-4823917)
               

               
               1-159, gnl|hg17|chr7 (1455686-1455939)
               

               
               1-159, gnl|Hg17|chr7 (1455716-1455873)
               

               
               1-159, gnl|loxAfr1|scaffold_67340 (3648-3903)
               

               
               1-159, gnl|mm7|chr5 (138861925-138862163)
               

               
               1-159, gnl|Mm7|chr5 (138861953-138862103)
               

               
               1-159, gnl|monDom2|scaffold_19 (52140573-52140833)
               

               
               1-159, gnl|rheMac2|chr3 (39576595-39576848)
               

               
               1-159, gnl|rn3|chr12 (15247300-15247054)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-159, gnl|bosTau2|chr25 (39670968-39670810)
               

               
               1-159, gnl|canFam2|chr6 (18367678-18367405)
               

               
               1-159, gnl|galGal2|chr14 (4823664-4823917)
               

               
               1-159, gnl|hg17|chr7 (1455686-1455939)
               

               
               1-159, gnl|Hg17|chr7 (1455716-1455873)
               

               
               1-159, gnl|loxAfr1|scaffold_67340 (3648-3903)
               

               
               1-159, gnl|mm7|chr5 (138861925-138862163)
               

               
               1-159, gnl|Mm7|chr5 (138861953-138862103)
               

               
               1-159, gnl|monDom2|scaffold_19 (52140573-52140833)
               

               
               1-159, gnl|rheMac2|chr3 (39576595-39576848)
               

               
               1-159, gnl|rn3|chr12 (15247300-15247054)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	1-159, gnl\|bosTau2\|chr25 (39670968-39670810)
	1-159, gnl\|canFam2\|chr6 (18367678-18367405)
	1-159, gnl\|galGal2\|chr14 (4823664-4823917)
	1-159, gnl\|hg17\|chr7 (1455686-1455939)
	1-159, gnl\|Hg17\|chr7 (1455716-1455873)
	1-159, gnl\|loxAfr1\|scaffold_67340 (3648-3903)
	1-159, gnl\|mm7\|chr5 (138861925-138862163)
	1-159, gnl\|Mm7\|chr5 (138861953-138862103)
	1-159, gnl\|monDom2\|scaffold_19 (52140573-52140833)
	1-159, gnl\|rheMac2\|chr3 (39576595-39576848)
	1-159, gnl\|rn3\|chr12 (15247300-15247054)