Non-Coding RNA Search

rece27c_h10.y1

Sequence:


               
               CAAAGGAGTGCCTTTCTCTTGACCCAGAGGAGCTAAGGAAGACGAAACCACAAAAAATCA
GTTCAACTATGGAAACACAGGTACAGTCAGCCCAGAACGTTTCAGGAACAGAGTGTGATG
CTGAACTGAAGGGAGCCCTAGATTTAGAAACCTGTGAGAAGCAAGATATGATGCCAGAGG
TAGACAAGCAGTCTGGTTCCCCAGAGAGCCAGGTGGAAAACACGCTGAACATACATGAAG
ATCTAGATAAAGTTAAACTTATCGAATATTACCTTAATAAGAACAAGGAAGGGACCCAGT
TATCTGATAACTCGCAGAAGGACGAATTACATGATGACAAAAATATTGAGCCAGTGGGAA
TAGACATCACGCTTAGTAGTTCTCTTCCCCAAGAAGGTGATCCCCCAATTAAAGGCACTA
AAGAGCCAGATAAAACCCGGGTGAAAGAAAGAGCATCTCTTCCATTGCAACTAGGCTCTG
CTACAGAAGAAAACATGAATAAAGACTATCCAGACTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAGGAGTGCCTTTCTCTTGACCCAGAGGAGCTAAGGAAGACGAAACCACAAAAAATCA
GTTCAACTATGGAAACACAGGTACAGTCAGCCCAGAACGTTTCAGGAACAGAGTGTGATG
CTGAACTGAAGGGAGCCCTAGATTTAGAAACCTGTGAGAAGCAAGATATGATGCCAGAGG
TAGACAAGCAGTCTGGTTCCCCAGAGAGCCAGGTGGAAAACACGCTGAACATACATGAAG
ATCTAGATAAAGTTAAACTTATCGAATATTACCTTAATAAGAACAAGGAAGGGACCCAGT
TATCTGATAACTCGCAGAAGGACGAATTACATGATGACAAAAATATTGAGCCAGTGGGAA
TAGACATCACGCTTAGTAGTTCTCTTCCCCAAGAAGGTGATCCCCCAATTAAAGGCACTA
AAGAGCCAGATAAAACCCGGGTGAAAGAAAGAGCATCTCTTCCATTGCAACTAGGCTCTG
CTACAGAAGAAAACATGAATAAAGACTATCCAGACTCCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|33872592|gb|AAH09399.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|33872592|gb|AAH09399.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-520, gnl|bosTau2|chr9 (12852480-12851967)
               

               
               1-520, gnl|Hg17|chr6 (126252200-126252719)
               

               
               1-520, gnl|Mm7|chr10 (30472015-30471502)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-520, gnl|bosTau2|chr9 (12852480-12851967)
               

               
               1-520, gnl|Hg17|chr6 (126252200-126252719)
               

               
               1-520, gnl|Mm7|chr10 (30472015-30471502)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	1-520, gnl\|bosTau2\|chr9 (12852480-12851967)
	1-520, gnl\|Hg17\|chr6 (126252200-126252719)
	1-520, gnl\|Mm7\|chr10 (30472015-30471502)