reep01c_o18.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACCCTGTGAGCACCAGCAGCGCGAGGCCCAGGCTCAGCGCACCCATCCCGGTGCCCGGC TCCACATCCCGCAGTGTGATGAGCAGGGCCACTTCCTGCCACTGCAGTGTCATGGCAGCA CCGGTTTCTGCTGGTGCGTGGACCCCAATGGTCAGGAAGTCCCTGGCACGCGGACTCCAC CCGGCTCCCTCCCTCCGGAGTGTGGACCACCAGAGCCCACCCAGAGGCCCCGGACTGTCT GCGAGCGCTGGAGGGAGAGCCTGCTGGAGCACTATGGCGGCACACCCAGGGACGACCAGT ACGTGCCCCAGTGCGACGACCTGGGCCACTTCACACCCCTGCAGTGCCACGGAAAGAGTG ACTTCTGTAGGTGTGTGGACCAAGATGGCAGAGAGGTGCAGGGCACCCGCTCACAGCCAG GCACCACCCCTGCATGTATACCTACGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACCCTGTGAGCACCAGCAGCGCGAGGCCCAGGCTCAGCGCACCCATCCCGGTGCCCGGC TCCACATCCCGCAGTGTGATGAGCAGGGCCACTTCCTGCCACTGCAGTGTCATGGCAGCA CCGGTTTCTGCTGGTGCGTGGACCCCAATGGTCAGGAAGTCCCTGGCACGCGGACTCCAC CCGGCTCCCTCCCTCCGGAGTGTGGACCACCAGAGCCCACCCAGAGGCCCCGGACTGTCT GCGAGCGCTGGAGGGAGAGCCTGCTGGAGCACTATGGCGGCACACCCAGGGACGACCAGT ACGTGCCCCAGTGCGACGACCTGGGCCACTTCACACCCCTGCAGTGCCACGGAAAGAGTG ACTTCTGTAGGTGTGTGGACCAAGATGGCAGAGAGGTGCAGGGCACCCGCTCACAGCCAG GCACCACCCCTGCATGTATACCTACGGTC |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 211-438, gnl|bosTau2|chr10 (29659517-29659744) | |
| 211-438, gnl|canFam2|chr8 (31253243-31253481) | |
| 211-438, gnl|danRer3|chr14 (33482692-33482465) | |
| 211-438, gnl|dasNov1|scaffold_31788 (5093-4857) | |
| 211-438, gnl|echTel1|scaffold_317370 (82603-82370) | |
| 211-438, gnl|fr1|chrUn (222140549-222140243) | |
| 211-438, gnl|galGal2|chr5 (54777355-54777588) | |
| 211-438, gnl|hg17|chr14 (51551514-51551747) | |
| 211-438, gnl|Hg17|chr14 (51551746-51551519) | |
| 211-438, gnl|loxAfr1|scaffold_1117 (96919-97152) | |
| 211-438, gnl|mm7|chr14 (17460551-17460318) | |
| 211-438, gnl|Mm7|chr14 (17460317-17460544) | |
| 211-438, gnl|monDom2|scaffold_73 (8159655-8159888) | |
| 211-438, gnl|oryCun1|scaffold_203177 (196991-197224) | |
| 211-438, gnl|panTro1|chr15 (50964743-50964976) | |
| 211-438, gnl|rheMac2|chr7 (115034276-115034509) | |
| 211-438, gnl|rn3|chr15 (4809132-4809365) | |
| 211-438, gnl|tetNig1|chr3 (3734429-3734742) | |
| 211-438, gnl|xenTro1|scaffold_355 (23510-23739) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 211-438, gnl|bosTau2|chr10 (29659517-29659744) | |
| 211-438, gnl|canFam2|chr8 (31253243-31253481) | |
| 211-438, gnl|danRer3|chr14 (33482692-33482465) | |
| 211-438, gnl|dasNov1|scaffold_31788 (5093-4857) | |
| 211-438, gnl|echTel1|scaffold_317370 (82603-82370) | |
| 211-438, gnl|fr1|chrUn (222140549-222140243) | |
| 211-438, gnl|galGal2|chr5 (54777355-54777588) | |
| 211-438, gnl|hg17|chr14 (51551514-51551747) | |
| 211-438, gnl|Hg17|chr14 (51551746-51551519) | |
| 211-438, gnl|loxAfr1|scaffold_1117 (96919-97152) | |
| 211-438, gnl|mm7|chr14 (17460551-17460318) | |
| 211-438, gnl|Mm7|chr14 (17460317-17460544) | |
| 211-438, gnl|monDom2|scaffold_73 (8159655-8159888) | |
| 211-438, gnl|oryCun1|scaffold_203177 (196991-197224) | |
| 211-438, gnl|panTro1|chr15 (50964743-50964976) | |
| 211-438, gnl|rheMac2|chr7 (115034276-115034509) | |
| 211-438, gnl|rn3|chr15 (4809132-4809365) | |
| 211-438, gnl|tetNig1|chr3 (3734429-3734742) | |
| 211-438, gnl|xenTro1|scaffold_355 (23510-23739) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |