Non-Coding RNA Search

reep02c_d22.y1

Sequence:


               
               AAAAATATAAAGCGGTTTTCAGGCAAACCTCCTTTTTCTTACTGAGCATGTGTGGCATCA
TCTCTCCTACTAGATAGAGTAATCTTTGCTGGAAAATATCATGGTTTTTGGGCCATGTAT
CCTCTGCCCTCATAAGCCTAGGATGAAAGGCATGAACAAATAGGTTCTCAAAAACATTTG
ATGAGTGAATATAAATTAATCATTGAAAAAGTACTTTCCTTCAATAGATTATTAGGAATA
TTATATCCTAAGAAATGTATTAGCCCAAATAGGACATGGGACTTGAAGTGCTGAAAGAAA
GAAAAATAGGACATGATGAAAAATATTATCTTTTATAAGATATATTAAGATTCTTTGGGT
TGCAAGTAAACTGAAAATTAAAAAGAAAAAGAAAGGCCTTggagttccctttatggctca
gcagttaatgaaccccactaggatccataagaatgcgggtttgatccctggcctcgctta
gtgggttaaggatctggcattgctgtgagctgtggtgtaggcc

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAATATAAAGCGGTTTTCAGGCAAACCTCCTTTTTCTTACTGAGCATGTGTGGCATCA
TCTCTCCTACTAGATAGAGTAATCTTTGCTGGAAAATATCATGGTTTTTGGGCCATGTAT
CCTCTGCCCTCATAAGCCTAGGATGAAAGGCATGAACAAATAGGTTCTCAAAAACATTTG
ATGAGTGAATATAAATTAATCATTGAAAAAGTACTTTCCTTCAATAGATTATTAGGAATA
TTATATCCTAAGAAATGTATTAGCCCAAATAGGACATGGGACTTGAAGTGCTGAAAGAAA
GAAAAATAGGACATGATGAAAAATATTATCTTTTATAAGATATATTAAGATTCTTTGGGT
TGCAAGTAAACTGAAAATTAAAAAGAAAAAGAAAGGCCTTggagttccctttatggctca
gcagttaatgaaccccactaggatccataagaatgcgggtttgatccctggcctcgctta
gtgggttaaggatctggcattgctgtgagctgtggtgtaggcc

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-299, gnl|bosTau2|chr5 (11414971-11415271)
               

               
               1-299, gnl|Mm7|chr10 (97074139-97074482)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-299, gnl|bosTau2|chr5 (11414971-11415271)
               

               
               1-299, gnl|Mm7|chr10 (97074139-97074482)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-299, gnl\|bosTau2\|chr5 (11414971-11415271)
	1-299, gnl\|Mm7\|chr10 (97074139-97074482)