Non-Coding RNA Search

reep02c_d8.y1

Sequence:


               
               GCATCCTGAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTCTGCACCTGGTG
GAGGGACCACGGCTACAGCGACGTCTTTGATGCCTACTTCCGCTGCGAGGGCCACGTCAA
GATCTACCATGGGAACTGCAACACACCCATCCCAGAGGCCTAGGCACCTCTCATCCGCTG
GGTCCTCGGGCTCTGGGGAAGGAGAGGGGCAGGGTGCCCCGACAGGCCTGGAGTGCTGTC
CCAACTCCTACAGAGACACCACAAGGATGTCCTTGTGACCAGGTGCTGCAGCTCTCCCAC
TGCGGGTCATTGTCCTGAGGCCACCTAGTGACGACTGGCCTGTACCCCACTGGTGCTTGG
GACCCTTTTGTGGCCAGGGGGCCAAGTGTCGTGAAGGATGAACACATAGCCCTGGCCTGG
TGGGCTAGGAAGCCTTTGAAAAGAAGGAAGAAAACGGTCCCCCTTGCCTTCAGCCCCCAA
AGCATGGAAGTCCTTTTAAGAACTGGGCTTTCCTGGACCAAAAATCAATTTATTTTCAAT
CAACAGGTGAGAGAGAAAGAGTACTGCTGTAGCTCCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATCCTGAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTCTGCACCTGGTG
GAGGGACCACGGCTACAGCGACGTCTTTGATGCCTACTTCCGCTGCGAGGGCCACGTCAA
GATCTACCATGGGAACTGCAACACACCCATCCCAGAGGCCTAGGCACCTCTCATCCGCTG
GGTCCTCGGGCTCTGGGGAAGGAGAGGGGCAGGGTGCCCCGACAGGCCTGGAGTGCTGTC
CCAACTCCTACAGAGACACCACAAGGATGTCCTTGTGACCAGGTGCTGCAGCTCTCCCAC
TGCGGGTCATTGTCCTGAGGCCACCTAGTGACGACTGGCCTGTACCCCACTGGTGCTTGG
GACCCTTTTGTGGCCAGGGGGCCAAGTGTCGTGAAGGATGAACACATAGCCCTGGCCTGG
TGGGCTAGGAAGCCTTTGAAAAGAAGGAAGAAAACGGTCCCCCTTGCCTTCAGCCCCCAA
AGCATGGAAGTCCTTTTAAGAACTGGGCTTTCCTGGACCAAAAATCAATTTATTTTCAAT
CAACAGGTGAGAGAGAAAGAGTACTGCTGTAGCTCCCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-576, gnl|bosTau2|chr1 (44148062-44147487)
               

               
               2-576, gnl|Hg17|chr3 (196271902-196271315)
               

               
               2-576, gnl|Mm7|chr16 (30631529-30631001)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-576, gnl|bosTau2|chr1 (44148062-44147487)
               

               
               2-576, gnl|Hg17|chr3 (196271902-196271315)
               

               
               2-576, gnl|Mm7|chr16 (30631529-30631001)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	2-576, gnl\|bosTau2\|chr1 (44148062-44147487)
	2-576, gnl\|Hg17\|chr3 (196271902-196271315)
	2-576, gnl\|Mm7\|chr16 (30631529-30631001)