Non-Coding RNA Search

reep02c_e24.y1

Sequence:


               
               ACTGGGTGGCACTAGTGAACCTCCAGCAGCAAAGAAGGGAAGTAGCAGAGCCCAAGAGAA
GCTAAAGGGAATTGCTTCTGGTCTCAATCCAGAAAACCACAGGGTTCCTTCCTTTGTTTT
TAAGCACTTCTTTTTTTGTGGCTTGACTTAGCACATTGTTATACTCGAGGTCAAACCAAT
TCACAACTTTGATTATTATATATTGTTACCATGATTAACAAATGTAGTGTTACTTCTCAG
AGGCCTAGGCAAATCAGAGAGAGGTTTTTATTTGGAATTCTATTTGGACTTTTTATTCCT
TAAAGAATGCaaatagaccgttctccaaggaagatatacagatggccaacaagcacatga
aaaaatgctcagcatTCCTCTAATAATTAGTGGTGTTGAGGAGCTCCTGCTATGGCGCAG
TGGGATTGACAGAATCTTGGGAGCACTGGGATGCGGGTTCGATCCATGGCCCCACACAGT
GGATTATGTGCAGCTGTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGGTGGCACTAGTGAACCTCCAGCAGCAAAGAAGGGAAGTAGCAGAGCCCAAGAGAA
GCTAAAGGGAATTGCTTCTGGTCTCAATCCAGAAAACCACAGGGTTCCTTCCTTTGTTTT
TAAGCACTTCTTTTTTTGTGGCTTGACTTAGCACATTGTTATACTCGAGGTCAAACCAAT
TCACAACTTTGATTATTATATATTGTTACCATGATTAACAAATGTAGTGTTACTTCTCAG
AGGCCTAGGCAAATCAGAGAGAGGTTTTTATTTGGAATTCTATTTGGACTTTTTATTCCT
TAAAGAATGCaaatagaccgttctccaaggaagatatacagatggccaacaagcacatga
aaaaatgctcagcatTCCTCTAATAATTAGTGGTGTTGAGGAGCTCCTGCTATGGCGCAG
TGGGATTGACAGAATCTTGGGAGCACTGGGATGCGGGTTCGATCCATGGCCCCACACAGT
GGATTATGTGCAGCTGTGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-313, gnl|bosTau2|chr1 (67479749-67479449)
               

               
               1-313, gnl|Hg17|chr3 (161204216-161203903)
               

               
               1-313, gnl|Mm7|chr3 (68810377-68810074)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-313, gnl|bosTau2|chr1 (67479749-67479449)
               

               
               1-313, gnl|Hg17|chr3 (161204216-161203903)
               

               
               1-313, gnl|Mm7|chr3 (68810377-68810074)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-313, gnl\|bosTau2\|chr1 (67479749-67479449)
	1-313, gnl\|Hg17\|chr3 (161204216-161203903)
	1-313, gnl\|Mm7\|chr3 (68810377-68810074)