Non-Coding RNA Search

reep03c_p6.y1

Sequence:


               
               TGTCAATATTGTCTCTGCTGAAGAAATGGAGAATTTTTCATGGATTAAAAGCAGAAACTT
GGAAACGGACTTTCTCAAGGTTGTATAACAGAATATGAGTAGGAATTGGGCCATTTGATT
TGTCTGACATCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCAATATTGTCTCTGCTGAAGAAATGGAGAATTTTTCATGGATTAAAAGCAGAAACTT
GGAAACGGACTTTCTCAAGGTTGTATAACAGAATATGAGTAGGAATTGGGCCATTTGATT
TGTCTGACATCTCTC

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               1-134, gnl|bosTau2|chr9 (23335151-23335285)
               

               
               1-134, gnl|canFam2|chr12 (69613539-69613652)
               

               
               1-134, gnl|echTel1|scaffold_173863 (2995-3109)
               

               
               1-134, gnl|hg17|chr6 (110204279-110204391)
               

               
               1-134, gnl|Hg17|chr6 (110204282-110204420)
               

               
               1-134, gnl|loxAfr1|scaffold_23095 (10182-10072)
               

               
               1-134, gnl|mm7|chr10 (41057185-41057089)
               

               
               1-134, gnl|Mm7|chr10 (41057180-41057060)
               

               
               1-134, gnl|oryCun1|scaffold_212300 (35994-36084)
               

               
               1-134, gnl|panTro1|chr5 (112518909-112519021)
               

               
               1-134, gnl|rheMac2|chr4 (154160209-154160097)
               

               
               1-134, gnl|rn3|chr20 (45200526-45200432)
               

               
               1-134, gnl|xenTro1|scaffold_174 (36041-36171)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-134, gnl|bosTau2|chr9 (23335151-23335285)
               

               
               1-134, gnl|canFam2|chr12 (69613539-69613652)
               

               
               1-134, gnl|echTel1|scaffold_173863 (2995-3109)
               

               
               1-134, gnl|hg17|chr6 (110204279-110204391)
               

               
               1-134, gnl|Hg17|chr6 (110204282-110204420)
               

               
               1-134, gnl|loxAfr1|scaffold_23095 (10182-10072)
               

               
               1-134, gnl|mm7|chr10 (41057185-41057089)
               

               
               1-134, gnl|Mm7|chr10 (41057180-41057060)
               

               
               1-134, gnl|oryCun1|scaffold_212300 (35994-36084)
               

               
               1-134, gnl|panTro1|chr5 (112518909-112519021)
               

               
               1-134, gnl|rheMac2|chr4 (154160209-154160097)
               

               
               1-134, gnl|rn3|chr20 (45200526-45200432)
               

               
               1-134, gnl|xenTro1|scaffold_174 (36041-36171)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-134, gnl\|bosTau2\|chr9 (23335151-23335285)
	1-134, gnl\|canFam2\|chr12 (69613539-69613652)
	1-134, gnl\|echTel1\|scaffold_173863 (2995-3109)
	1-134, gnl\|hg17\|chr6 (110204279-110204391)
	1-134, gnl\|Hg17\|chr6 (110204282-110204420)
	1-134, gnl\|loxAfr1\|scaffold_23095 (10182-10072)
	1-134, gnl\|mm7\|chr10 (41057185-41057089)
	1-134, gnl\|Mm7\|chr10 (41057180-41057060)
	1-134, gnl\|oryCun1\|scaffold_212300 (35994-36084)
	1-134, gnl\|panTro1\|chr5 (112518909-112519021)
	1-134, gnl\|rheMac2\|chr4 (154160209-154160097)
	1-134, gnl\|rn3\|chr20 (45200526-45200432)
	1-134, gnl\|xenTro1\|scaffold_174 (36041-36171)