Non-Coding RNA Search

reep04c_n8.y1

Sequence:


               
               AAGAATTTCTAGAAGGAAAGAAAATTTAAAATTTTTGTTGTCTTTAGCAATATCACCTGA
GTGTATCATAATAGAATACAGACTTTCTATAAGATTATTTTAAATGTTACAAATAATTTA
CATTCCTCTCATGTGTTATCCTGATGTTCATTTTCTGTGGTTGTCATGCCATTGAATCTG
CTGCTTATTAGCTAAATAGTGTGTTTTATTGTGCCAAAACATGTCAAAACCATGACCTCT
TTGGATGTTTTATTTGAAAGGATGTTCATCCTAGTGGCTGATTATGGATTCCTCTGTCTA
CGTAGTGAAAACTGACACCCATTTTTACCTATTGTTTTTTGTTACTTTCATGGTGATATC
ATCTGCCAAAGTTTCAAGGCATTCATTTGATTCTTTGAACAACTCTTTACCTTGGTATGG
ATGTGAATTTATTTGCAGTCCATATATGCTACTTTTCTGTACTAAAAGTATAAATGGTTT
ACCATGACATCCAAAAACTTAAAATTGCCTCAAAGGAGGTCACCATGGTGATGAATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAATTTCTAGAAGGAAAGAAAATTTAAAATTTTTGTTGTCTTTAGCAATATCACCTGA
GTGTATCATAATAGAATACAGACTTTCTATAAGATTATTTTAAATGTTACAAATAATTTA
CATTCCTCTCATGTGTTATCCTGATGTTCATTTTCTGTGGTTGTCATGCCATTGAATCTG
CTGCTTATTAGCTAAATAGTGTGTTTTATTGTGCCAAAACATGTCAAAACCATGACCTCT
TTGGATGTTTTATTTGAAAGGATGTTCATCCTAGTGGCTGATTATGGATTCCTCTGTCTA
CGTAGTGAAAACTGACACCCATTTTTACCTATTGTTTTTTGTTACTTTCATGGTGATATC
ATCTGCCAAAGTTTCAAGGCATTCATTTGATTCTTTGAACAACTCTTTACCTTGGTATGG
ATGTGAATTTATTTGCAGTCCATATATGCTACTTTTCTGTACTAAAAGTATAAATGGTTT
ACCATGACATCCAAAAACTTAAAATTGCCTCAAAGGAGGTCACCATGGTGATGAATCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-538, gnl|bosTau2|chr4 (3934516-3933978)
               

               
               1-538, gnl|Hg17|chr7 (7057905-7058669)
               

               
               1-538, gnl|Mm7|chr6 (7830229-7830753)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-538, gnl|bosTau2|chr4 (3934516-3933978)
               

               
               1-538, gnl|Hg17|chr7 (7057905-7058669)
               

               
               1-538, gnl|Mm7|chr6 (7830229-7830753)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-538, gnl\|bosTau2\|chr4 (3934516-3933978)
	1-538, gnl\|Hg17\|chr7 (7057905-7058669)
	1-538, gnl\|Mm7\|chr6 (7830229-7830753)