Non-Coding RNA Search

reep04c_p18.y1

Sequence:


               
               GCGGCCTCCGAGGAGCACGATTCCTCGGCTGAGTGCACCCCAGACGGCAGTGGAGGAGGA
GGAAACAAAAACATTTAAAGACCTGTGTGTGACAGATGTATTGTGTGAAGCTTGTGATCA
GTTGGGATGGACAAAGCCAACGAAGATCCAGATTGAAGCTATTCCTTTGGCCTTACAAGG
TCGTGATATCATTGGACTGGCAGAAACTGGCTCTGGGAAGACAGGGGCCTTTGCTCTGCC
CATTCTGAACGCACTGCTGGAGACTCCCCAGCGTTTGTTTGCCTTAGTTCTCACCCCCAC
TCGGGAGCTGGCCTTTCAGATCTCAGAGCAGTTTGAAGCCCTGGGGTCTTCTATTGGGGT
GCAGTGTGCCGTGATTGTCGGTGGAATTGATTCAATGTCACAGTCTCTGGCCCTGGCGAA
AAAGCCACATATAGTAATAGCAACTCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCTCCGAGGAGCACGATTCCTCGGCTGAGTGCACCCCAGACGGCAGTGGAGGAGGA
GGAAACAAAAACATTTAAAGACCTGTGTGTGACAGATGTATTGTGTGAAGCTTGTGATCA
GTTGGGATGGACAAAGCCAACGAAGATCCAGATTGAAGCTATTCCTTTGGCCTTACAAGG
TCGTGATATCATTGGACTGGCAGAAACTGGCTCTGGGAAGACAGGGGCCTTTGCTCTGCC
CATTCTGAACGCACTGCTGGAGACTCCCCAGCGTTTGTTTGCCTTAGTTCTCACCCCCAC
TCGGGAGCTGGCCTTTCAGATCTCAGAGCAGTTTGAAGCCCTGGGGTCTTCTATTGGGGT
GCAGTGTGCCGTGATTGTCGGTGGAATTGATTCAATGTCACAGTCTCTGGCCCTGGCGAA
AAAGCCACATATAGTAATAGCAACTCCTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61864785|ref|XP_581950.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61864785|ref|XP_581950.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               166-408, gnl|bosTau2|chr5 (57738507-57738270)
               

               
               166-408, gnl|Hg17|chr12 (12865396-12865633)
               

               
               166-408, gnl|Mm7|chr6 (135029504-135029740)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               166-408, gnl|bosTau2|chr5 (57738507-57738270)
               

               
               166-408, gnl|Hg17|chr12 (12865396-12865633)
               

               
               166-408, gnl|Mm7|chr6 (135029504-135029740)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	166-408, gnl\|bosTau2\|chr5 (57738507-57738270)
	166-408, gnl\|Hg17\|chr12 (12865396-12865633)
	166-408, gnl\|Mm7\|chr6 (135029504-135029740)