Non-Coding RNA Search

reep06c_c13.y1

Sequence:


               
               CCCAAGAGGAGGAAGCAGGAAAGCATTTAGGGTTGGTATCAGGCCAGTGTAATTAAGCTT
CCCACCTGTCCAAACCACAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAGAAAAAGAAAA
AAGAAAAGGGTCTCCCAGCTTCTATTTCTAGGCTCTCTATGCTTTATTCCAAAATGAAGC
AGGCAACGTTCAGACATCGGCCATTTAGTGATTGAAGGTGAATTGCCAGCAGCAAGCATG
CTTTGATAATCTGGTTCAAACTACCATCAGAAGAAACCCCCCACAGTACCTGAAATGTGA
TTGTTGCAGTGTTCAGTTTCCTTGGGATCCTGCTCCCTTCACACCTTAAGCCCACGTCCT
TCGCTTTGGCTGATTCAGCTCCCAGAAGAGACCAGGCGTGTGGCACGGGACTGTCCAACT
TTACTTGGACTAGGCATAGCTGATAGTTGGCCCCAGCAGCAAAATTGTGAAAGTGACACT
CCCTGAAAGCAAAGGAATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAAGAGGAGGAAGCAGGAAAGCATTTAGGGTTGGTATCAGGCCAGTGTAATTAAGCTT
CCCACCTGTCCAAACCACAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAGAAAAAGAAAA
AAGAAAAGGGTCTCCCAGCTTCTATTTCTAGGCTCTCTATGCTTTATTCCAAAATGAAGC
AGGCAACGTTCAGACATCGGCCATTTAGTGATTGAAGGTGAATTGCCAGCAGCAAGCATG
CTTTGATAATCTGGTTCAAACTACCATCAGAAGAAACCCCCCACAGTACCTGAAATGTGA
TTGTTGCAGTGTTCAGTTTCCTTGGGATCCTGCTCCCTTCACACCTTAAGCCCACGTCCT
TCGCTTTGGCTGATTCAGCTCCCAGAAGAGACCAGGCGTGTGGCACGGGACTGTCCAACT
TTACTTGGACTAGGCATAGCTGATAGTTGGCCCCAGCAGCAAAATTGTGAAAGTGACACT
CCCTGAAAGCAAAGGAATAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               122-500, gnl|bosTau2|chr17 (1745337-1744966)
               

               
               122-500, gnl|Hg17|chr17 (44484567-44484967)
               

               
               122-500, gnl|Mm7|chr11 (96069805-96069453)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               122-500, gnl|bosTau2|chr17 (1745337-1744966)
               

               
               122-500, gnl|Hg17|chr17 (44484567-44484967)
               

               
               122-500, gnl|Mm7|chr11 (96069805-96069453)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	122-500, gnl\|bosTau2\|chr17 (1745337-1744966)
	122-500, gnl\|Hg17\|chr17 (44484567-44484967)
	122-500, gnl\|Mm7\|chr11 (96069805-96069453)