reep06c_g8.y1
|
CCATGAATGACATGAAGCTGTGGGAGAAGGGAAGCATACAGATGCCATTTATCAGCATAC
CTGTTCTTGACATTAAAAAGTGCCAGCCAGAAATGTGGAAAGCAATAGCTTGTTCACTGC
AGATCAAACCTTGTCATAGTAAATCCCGGGGAAGTATTATTTGCAAATCAGACTGTGTAG
AGATTCTCAAGAAATGTGGGGACCAGAACAAATTCCCTGAAGACCACACAGCTGAAAGTA
TTTGTGAGCTCCTGTCACCTACAGATGACCTGGAGAATTGCATACCTTTGGATACCTACC
TCAGGCCAAGCACTTTAGGTAACATTGTGGAAGAGGTGACTCATCCCTGTAACCCAAATC
CTTGCCCCGCCCATGAACTCTGTTAGGTCAACCGGAAGGGGTGTCCAGCTGGAGATCCCT
GTCTTCCCTACTCTTGTGTGCAAGGTTGCAAGTTGGGAGAAGCCTCTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCATGAATGACATGAAGCTGTGGGAGAAGGGAAGCATACAGATGCCATTTATCAGCATAC
CTGTTCTTGACATTAAAAAGTGCCAGCCAGAAATGTGGAAAGCAATAGCTTGTTCACTGC
AGATCAAACCTTGTCATAGTAAATCCCGGGGAAGTATTATTTGCAAATCAGACTGTGTAG
AGATTCTCAAGAAATGTGGGGACCAGAACAAATTCCCTGAAGACCACACAGCTGAAAGTA
TTTGTGAGCTCCTGTCACCTACAGATGACCTGGAGAATTGCATACCTTTGGATACCTACC
TCAGGCCAAGCACTTTAGGTAACATTGTGGAAGAGGTGACTCATCCCTGTAACCCAAATC
CTTGCCCCGCCCATGAACTCTGTTAGGTCAACCGGAAGGGGTGTCCAGCTGGAGATCCCT
GTCTTCCCTACTCTTGTGTGCAAGGTTGCAAGTTGGGAGAAGCCTCTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
160-316, gnl|bosTau2|chr8 (31901898-31901743) |
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160-316, gnl|canFam2|chr11 (55596569-55596739) |
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160-316, gnl|danRer3|chr24 (252613-252465) |
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160-316, gnl|dasNov1|scaffold_43829 (1986-2260) |
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160-316, gnl|echTel1|scaffold_321473 (45808-45984) |
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160-316, gnl|fr1|chrUn (314843454-314843305) |
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160-316, gnl|galGal2|chr2 (55868256-55868418) |
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160-316, gnl|hg17|chr9 (36092062-36092237) |
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160-316, gnl|Hg17|chr9 (36092083-36092238) |
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160-316, gnl|loxAfr1|scaffold_24387 (44220-44396) |
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160-316, gnl|mm7|chr4 (43938850-43939021) |
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160-316, gnl|Mm7|chr4 (43938867-43939030) |
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160-316, gnl|monDom2|scaffold_19 (8082581-8082760) |
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160-316, gnl|oryCun1|scaffold_201438 (96499-96676) |
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160-316, gnl|panTro1|chr11 (36659433-36659608) |
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160-316, gnl|rheMac2|chr15 (41367282-41367108) |
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160-316, gnl|rn3|chr5 (60390235-60390406) |
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160-316, gnl|tetNig1|chrUn_random (130058474-130058640) |
|
160-316, gnl|xenTro1|scaffold_453 (700942-700786) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
160-316, gnl|bosTau2|chr8 (31901898-31901743) |
|
160-316, gnl|canFam2|chr11 (55596569-55596739) |
|
160-316, gnl|danRer3|chr24 (252613-252465) |
|
160-316, gnl|dasNov1|scaffold_43829 (1986-2260) |
|
160-316, gnl|echTel1|scaffold_321473 (45808-45984) |
|
160-316, gnl|fr1|chrUn (314843454-314843305) |
|
160-316, gnl|galGal2|chr2 (55868256-55868418) |
|
160-316, gnl|hg17|chr9 (36092062-36092237) |
|
160-316, gnl|Hg17|chr9 (36092083-36092238) |
|
160-316, gnl|loxAfr1|scaffold_24387 (44220-44396) |
|
160-316, gnl|mm7|chr4 (43938850-43939021) |
|
160-316, gnl|Mm7|chr4 (43938867-43939030) |
|
160-316, gnl|monDom2|scaffold_19 (8082581-8082760) |
|
160-316, gnl|oryCun1|scaffold_201438 (96499-96676) |
|
160-316, gnl|panTro1|chr11 (36659433-36659608) |
|
160-316, gnl|rheMac2|chr15 (41367282-41367108) |
|
160-316, gnl|rn3|chr5 (60390235-60390406) |
|
160-316, gnl|tetNig1|chrUn_random (130058474-130058640) |
|
160-316, gnl|xenTro1|scaffold_453 (700942-700786) |
