Non-Coding RNA Search

reep06c_l19.y1

Sequence:


               
               TGTGACATAGACACCGTCCATAAGGGGGACAGTAATTCCTGCCTTGGGAACTCCTGGGCG
GGAGGAGGGGGACACTTCCCTGGAGGCGCTACTGAATGTATGAGAAGCTGGTGCTGGGGC
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGACATAGACACCGTCCATAAGGGGGACAGTAATTCCTGCCTTGGGAACTCCTGGGCG
GGAGGAGGGGGACACTTCCCTGGAGGCGCTACTGAATGTATGAGAAGCTGGTGCTGGGGC
G

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               1-119, gnl|bosTau2|chr19 (34511225-34511107)
               

               
               1-119, gnl|canFam2|chr9 (25797894-25797666)
               

               
               1-119, gnl|dasNov1|scaffold_1615 (92656-92882)
               

               
               1-119, gnl|hg17|chr17 (35501975-35502202)
               

               
               1-119, gnl|Hg17|chr17 (35502038-35502157)
               

               
               1-119, gnl|mm7|chr11 (98876355-98876579)
               

               
               1-119, gnl|Mm7|chr11 (98876412-98876536)
               

               
               1-119, gnl|monDom2|scaffold_18 (49317316-49317527)
               

               
               1-119, gnl|rheMac2|chr16 (50196971-50197197)
               

               
               1-119, gnl|rn3|chr10 (87555012-87555242)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-119, gnl|bosTau2|chr19 (34511225-34511107)
               

               
               1-119, gnl|canFam2|chr9 (25797894-25797666)
               

               
               1-119, gnl|dasNov1|scaffold_1615 (92656-92882)
               

               
               1-119, gnl|hg17|chr17 (35501975-35502202)
               

               
               1-119, gnl|Hg17|chr17 (35502038-35502157)
               

               
               1-119, gnl|mm7|chr11 (98876355-98876579)
               

               
               1-119, gnl|Mm7|chr11 (98876412-98876536)
               

               
               1-119, gnl|monDom2|scaffold_18 (49317316-49317527)
               

               
               1-119, gnl|rheMac2|chr16 (50196971-50197197)
               

               
               1-119, gnl|rn3|chr10 (87555012-87555242)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-119, gnl\|bosTau2\|chr19 (34511225-34511107)
	1-119, gnl\|canFam2\|chr9 (25797894-25797666)
	1-119, gnl\|dasNov1\|scaffold_1615 (92656-92882)
	1-119, gnl\|hg17\|chr17 (35501975-35502202)
	1-119, gnl\|Hg17\|chr17 (35502038-35502157)
	1-119, gnl\|mm7\|chr11 (98876355-98876579)
	1-119, gnl\|Mm7\|chr11 (98876412-98876536)
	1-119, gnl\|monDom2\|scaffold_18 (49317316-49317527)
	1-119, gnl\|rheMac2\|chr16 (50196971-50197197)
	1-119, gnl\|rn3\|chr10 (87555012-87555242)