Non-Coding RNA Search

reep12c_l15.y1

Sequence:


               
               AATTGTCGCTGCAACCATGGTTTCATCCTTTCTCACAATAACGACTGCATAGATGTTGAT
GAATGTGCAACTGGAAATGGGAACCTTTGCAGAAATGGCCAATGCATCAATACAGTGGGG
TCCTTCCAGTGTCAATGCAATGAAGGCTATGAGGTGGCTCCAGATGGGAGAACCTGTGTG
GATATCAATGAATGTCTCCTAGAACCTGGAAAATGTGCACCAGGCACCTGTCAAAATTTG
GATGGGTCCTACAGGTGCATTTGTCCACCTGGATACAGTCTCCAGAATGATAAGTGTGAA
GATATTGATGAGTGTGTTGAAGAGCCAGAAATTTGTGCCTTGGGCACATGCAGTAACACC
GAAGGCAGCTTTAAATGTCTGTGTCCAGATGGGTTCTCCTTGTCCTCCACTGGAAGAAGG
TGCCAAGATCTGCGAATGAGCTACTGTTATGCGAAGTTTGAAGGAGGAAAGTGTTCATCA
CCCAAATCCAGAAATCACTCCAAACAGGAATGCTGCTGCGCCTTGAAGGGAGAAGGTTGG
GGAGATCCCTGTGAGCTGTGCCCTACTGAACCCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTGTCGCTGCAACCATGGTTTCATCCTTTCTCACAATAACGACTGCATAGATGTTGAT
GAATGTGCAACTGGAAATGGGAACCTTTGCAGAAATGGCCAATGCATCAATACAGTGGGG
TCCTTCCAGTGTCAATGCAATGAAGGCTATGAGGTGGCTCCAGATGGGAGAACCTGTGTG
GATATCAATGAATGTCTCCTAGAACCTGGAAAATGTGCACCAGGCACCTGTCAAAATTTG
GATGGGTCCTACAGGTGCATTTGTCCACCTGGATACAGTCTCCAGAATGATAAGTGTGAA
GATATTGATGAGTGTGTTGAAGAGCCAGAAATTTGTGCCTTGGGCACATGCAGTAACACC
GAAGGCAGCTTTAAATGTCTGTGTCCAGATGGGTTCTCCTTGTCCTCCACTGGAAGAAGG
TGCCAAGATCTGCGAATGAGCTACTGTTATGCGAAGTTTGAAGGAGGAAAGTGTTCATCA
CCCAAATCCAGAAATCACTCCAAACAGGAATGCTGCTGCGCCTTGAAGGGAGAAGGTTGG
GGAGATCCCTGTGAGCTGTGCCCTACTGAACCCGA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               51-181, gnl|bosTau2|chr10 (42608625-42608755)
               

               
               51-181, gnl|Hg17|chr15 (46524995-46524865)
               

               
               51-181, gnl|Mm7|chr2 (125069974-125069844)
               


               
               300-427, gnl|bosTau2|chr10 (42611946-42612073)
               

               
               300-427, gnl|Hg17|chr15 (46521337-46521210)
               

               
               300-427, gnl|Mm7|chr2 (125065806-125065679)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-181, gnl|bosTau2|chr10 (42608625-42608755)
               

               
               51-181, gnl|Hg17|chr15 (46524995-46524865)
               

               
               51-181, gnl|Mm7|chr2 (125069974-125069844)
               


               
               300-427, gnl|bosTau2|chr10 (42611946-42612073)
               

               
               300-427, gnl|Hg17|chr15 (46521337-46521210)
               

               
               300-427, gnl|Mm7|chr2 (125065806-125065679)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	51-181, gnl\|bosTau2\|chr10 (42608625-42608755)
	51-181, gnl\|Hg17\|chr15 (46524995-46524865)
	51-181, gnl\|Mm7\|chr2 (125069974-125069844)

	300-427, gnl\|bosTau2\|chr10 (42611946-42612073)
	300-427, gnl\|Hg17\|chr15 (46521337-46521210)
	300-427, gnl\|Mm7\|chr2 (125065806-125065679)