Non-Coding RNA Search

reep13c_c3.y1

Sequence:


               
               TCCCGAGAAGGCCCCACCGCCAGCCCGGCGTGCGTGCAGCCCCAGAGCCCCCGCTGCTGC
AGCGCCTCCCCAGAGGAGCCGCTGAGCGGTGAATCTTCCGAGAGCTGCTGCCCCACCAGC
CGGGAAGCTGCCGTTGAAGCCTTGGAATTGCTGGGAGCCACCTACGTGGATAAGAAGCGG
GATCTGCTTGGGGCCCTGAAACACTGGAGACGGGCCATGGAGCTGCGTCACCAAGGGGGT
GCGTATCTGCCCAAACCCGAGCCCCCGCAGCTGGTCCTGGCCTATGACTATTCCAGGGAG
GTGAATACCGCTGAGGAGTTGGAGGCACTCATCACCGACCCGGATGAGATGCGCATGCAA
GCCCTGTTGATCCGCGAGCGCATCCTGGGGCCCTCCCACCCGGACACTTCTTACTATATC
CGTTACCGGGGCGCGGTGTACGCCGACTCAGGCAACTTCGAGCGCTGCATCCGCCTGTGG
AAGTACGCCCTGGACATGCAGCAGAACAACCTGGAGCCTCTGAGTCCCATGACCGCCAGC
AGCTTCCTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCGAGAAGGCCCCACCGCCAGCCCGGCGTGCGTGCAGCCCCAGAGCCCCCGCTGCTGC
AGCGCCTCCCCAGAGGAGCCGCTGAGCGGTGAATCTTCCGAGAGCTGCTGCCCCACCAGC
CGGGAAGCTGCCGTTGAAGCCTTGGAATTGCTGGGAGCCACCTACGTGGATAAGAAGCGG
GATCTGCTTGGGGCCCTGAAACACTGGAGACGGGCCATGGAGCTGCGTCACCAAGGGGGT
GCGTATCTGCCCAAACCCGAGCCCCCGCAGCTGGTCCTGGCCTATGACTATTCCAGGGAG
GTGAATACCGCTGAGGAGTTGGAGGCACTCATCACCGACCCGGATGAGATGCGCATGCAA
GCCCTGTTGATCCGCGAGCGCATCCTGGGGCCCTCCCACCCGGACACTTCTTACTATATC
CGTTACCGGGGCGCGGTGTACGCCGACTCAGGCAACTTCGAGCGCTGCATCCGCCTGTGG
AAGTACGCCCTGGACATGCAGCAGAACAACCTGGAGCCTCTGAGTCCCATGACCGCCAGC
AGCTTCCTCTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-552, gnl|bosTau2|chr7 (15390654-15391191)
               

               
               4-552, gnl|Hg17|chr19 (4743593-4744177)
               

               
               4-552, gnl|Mm7|chr17 (54415880-54416423)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-552, gnl|bosTau2|chr7 (15390654-15391191)
               

               
               4-552, gnl|Hg17|chr19 (4743593-4744177)
               

               
               4-552, gnl|Mm7|chr17 (54415880-54416423)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	4-552, gnl\|bosTau2\|chr7 (15390654-15391191)
	4-552, gnl\|Hg17\|chr19 (4743593-4744177)
	4-552, gnl\|Mm7\|chr17 (54415880-54416423)