Non-Coding RNA Search

reep13c_k20.y1

Sequence:


               
               ACATAATAGGGgttcccgtcgtggctcaacagaaatgaatccgactggcatccacaagga
tacaggtttgatccctgacgtcaatcagggggttaaggatccggcgttgcgtgagccgtg
gtgtaggttacagacgtgactcagatcccacatccatatggctgtgaatgtggtgtgggc
cagcagctacagctccaattcgacccctagcctgggaacctccatatgccatgggtgtgg
ccctaaaaagacaaGATTTTTTTTATTTAAAAGAATATTAATAATCCAAGGGGGAGGCTG
GTGGGAGAGGGATGGAGTGGGAGGTTGGGTTTTGCAGATATAAGCTATTATATGTAGAAT
GGCTAAACAGTAAGATTCTACTGTATAGCATGGGGAACTATATTCAGTATCTTATGATAA
ACCATAATGGAAAAGAATATTTTAGGGAGTTCCCGCTGCAGCTCAGTGGGTTGATGATCC
AGCTTGTCTTTGCTCCATGGGTTAAGGATCCAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATAATAGGGgttcccgtcgtggctcaacagaaatgaatccgactggcatccacaagga
tacaggtttgatccctgacgtcaatcagggggttaaggatccggcgttgcgtgagccgtg
gtgtaggttacagacgtgactcagatcccacatccatatggctgtgaatgtggtgtgggc
cagcagctacagctccaattcgacccctagcctgggaacctccatatgccatgggtgtgg
ccctaaaaagacaaGATTTTTTTTATTTAAAAGAATATTAATAATCCAAGGGGGAGGCTG
GTGGGAGAGGGATGGAGTGGGAGGTTGGGTTTTGCAGATATAAGCTATTATATGTAGAAT
GGCTAAACAGTAAGATTCTACTGTATAGCATGGGGAACTATATTCAGTATCTTATGATAA
ACCATAATGGAAAAGAATATTTTAGGGAGTTCCCGCTGCAGCTCAGTGGGTTGATGATCC
AGCTTGTCTTTGCTCCATGGGTTAAGGATCCAGCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               287-444, gnl|bosTau2|chr13 (17611521-17611678)
               


               
               289-442, gnl|bosTau2|chr10 (49947948-49947795)
               


               
               307-440, gnl|bosTau2|chr8 (34060177-34060044)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               287-444, gnl|bosTau2|chr13 (17611521-17611678)
               


               
               289-442, gnl|bosTau2|chr10 (49947948-49947795)
               


               
               307-440, gnl|bosTau2|chr8 (34060177-34060044)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	287-444, gnl\|bosTau2\|chr13 (17611521-17611678)

	289-442, gnl\|bosTau2\|chr10 (49947948-49947795)

	307-440, gnl\|bosTau2\|chr8 (34060177-34060044)