Non-Coding RNA Search

reep14c_i13.y1

Sequence:


               
               CTAGGGCTCATATTTTAACGTACATGTTGAGATAGACAATTTTCTAAATACAGTTAACAT
GAGCAACAGTTTTGATTGGCTCTTCATCTCCATTTCCAATCAACTCAGCTGAAAGTCCTG
GGTTATTTATTTAGCTACGAGTTGACTCAAGTATGAACATTTTATGTAACTGCACTCAAA
GCTATATATGCCTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGGGCTCATATTTTAACGTACATGTTGAGATAGACAATTTTCTAAATACAGTTAACAT
GAGCAACAGTTTTGATTGGCTCTTCATCTCCATTTCCAATCAACTCAGCTGAAAGTCCTG
GGTTATTTATTTAGCTACGAGTTGACTCAAGTATGAACATTTTATGTAACTGCACTCAAA
GCTATATATGCCTCAT

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               3-196, gnl|bosTau2|chr5 (70169944-70169758)
               

               
               3-196, gnl|canFam2|chr10 (27921274-27921050)
               

               
               3-196, gnl|dasNov1|scaffold_2883 (58780-58991)
               

               
               3-196, gnl|hg17|chr22 (39038546-39038769)
               

               
               3-196, gnl|Hg17|chr22 (39038646-39039158)
               

               
               3-196, gnl|loxAfr1|scaffold_6441 (10484-10699)
               

               
               3-196, gnl|mm7|chr15 (81009819-81009978)
               

               
               3-196, gnl|panTro1|chr23 (39291199-39291422)
               

               
               3-196, gnl|rheMac2|chr10 (84256368-84256591)
               

               
               3-196, gnl|rn3|chr7 (119231651-119231834)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-196, gnl|bosTau2|chr5 (70169944-70169758)
               

               
               3-196, gnl|canFam2|chr10 (27921274-27921050)
               

               
               3-196, gnl|dasNov1|scaffold_2883 (58780-58991)
               

               
               3-196, gnl|hg17|chr22 (39038546-39038769)
               

               
               3-196, gnl|Hg17|chr22 (39038646-39039158)
               

               
               3-196, gnl|loxAfr1|scaffold_6441 (10484-10699)
               

               
               3-196, gnl|mm7|chr15 (81009819-81009978)
               

               
               3-196, gnl|panTro1|chr23 (39291199-39291422)
               

               
               3-196, gnl|rheMac2|chr10 (84256368-84256591)
               

               
               3-196, gnl|rn3|chr7 (119231651-119231834)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	3-196, gnl\|bosTau2\|chr5 (70169944-70169758)
	3-196, gnl\|canFam2\|chr10 (27921274-27921050)
	3-196, gnl\|dasNov1\|scaffold_2883 (58780-58991)
	3-196, gnl\|hg17\|chr22 (39038546-39038769)
	3-196, gnl\|Hg17\|chr22 (39038646-39039158)
	3-196, gnl\|loxAfr1\|scaffold_6441 (10484-10699)
	3-196, gnl\|mm7\|chr15 (81009819-81009978)
	3-196, gnl\|panTro1\|chr23 (39291199-39291422)
	3-196, gnl\|rheMac2\|chr10 (84256368-84256591)
	3-196, gnl\|rn3\|chr7 (119231651-119231834)