reep15c_l7.y1
|
TGCCAGACGAGAAGGGGAACCCTCCCCTGTGGCTCGCCCTGGCAAATAATCTGGAGGACA
TCGCGTCCACTCTGGTCAGACATGGTTGTGATGCCACGTGCTGGGGTCCAGGACCTAGCG
GGTGCCTTCAGACACTGCTGCACAGAGCCATTGACGAAAACAACGAGGCCATCGCCTGCT
TTCTTATTCGAAGTGGCTGCGACGTGAATAGTCCCAGACAGCCTGGTGCTAATGGAGAAG
GAGAGGAGGAGGCCAGAGACGGGCAGACCCCCTTGCATTTGGCAGCCTCCTGGGGCCTGG
AGGAGACGATACAGTGCCTTCTGGAGTTCGGTGCCAATGTCAATGCACAGGATGCAGAAG
GAAGAACGCCTGTCCACGTGGCCATCAGCAACCAACACGGCGTCATCATTCAGCTGCTGA
TCTCTCACCCCGACATCCACCTGAACGTGCGAGACAGGCAGGGCCTGACCCCCTTTGCCT
GCGCCATGACCTACAAGAACAAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCCAGACGAGAAGGGGAACCCTCCCCTGTGGCTCGCCCTGGCAAATAATCTGGAGGACA
TCGCGTCCACTCTGGTCAGACATGGTTGTGATGCCACGTGCTGGGGTCCAGGACCTAGCG
GGTGCCTTCAGACACTGCTGCACAGAGCCATTGACGAAAACAACGAGGCCATCGCCTGCT
TTCTTATTCGAAGTGGCTGCGACGTGAATAGTCCCAGACAGCCTGGTGCTAATGGAGAAG
GAGAGGAGGAGGCCAGAGACGGGCAGACCCCCTTGCATTTGGCAGCCTCCTGGGGCCTGG
AGGAGACGATACAGTGCCTTCTGGAGTTCGGTGCCAATGTCAATGCACAGGATGCAGAAG
GAAGAACGCCTGTCCACGTGGCCATCAGCAACCAACACGGCGTCATCATTCAGCTGCTGA
TCTCTCACCCCGACATCCACCTGAACGTGCGAGACAGGCAGGGCCTGACCCCCTTTGCCT
GCGCCATGACCTACAAGAACAAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
183-351, gnl|bosTau2|chr19 (19304001-19303833) |
|
183-351, gnl|canFam2|chr5 (33252499-33252682) |
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183-351, gnl|danRer3|chr5 (26067903-26068093) |
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183-351, gnl|dasNov1|scaffold_15218 (41249-41065) |
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183-351, gnl|echTel1|scaffold_318100 (160230-160418) |
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183-351, gnl|fr1|chrUn (222942076-222942240) |
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183-351, gnl|galGal2|chr19 (2949545-2949375) |
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183-351, gnl|hg17|chr17 (4029761-4029949) |
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183-351, gnl|Hg17|chr17 (4029933-4029764) |
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183-351, gnl|mm7|chr11 (72836073-72835894) |
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183-351, gnl|Mm7|chr11 (72835902-72836068) |
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183-351, gnl|monDom2|scaffold_310 (51265-51094) |
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183-351, gnl|oryCun1|scaffold_202586 (43434-43619) |
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183-351, gnl|panTro1|chr19 (4333104-4333292) |
|
183-351, gnl|rheMac2|chr16 (3907955-3908142) |
|
183-351, gnl|rn3|chr10 (59653615-59653437) |
|
183-351, gnl|tetNig1|chr7 (1680712-1680552) |
|
183-351, gnl|xenTro1|scaffold_21 (2339157-2339326) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
183-351, gnl|bosTau2|chr19 (19304001-19303833) |
|
183-351, gnl|canFam2|chr5 (33252499-33252682) |
|
183-351, gnl|danRer3|chr5 (26067903-26068093) |
|
183-351, gnl|dasNov1|scaffold_15218 (41249-41065) |
|
183-351, gnl|echTel1|scaffold_318100 (160230-160418) |
|
183-351, gnl|fr1|chrUn (222942076-222942240) |
|
183-351, gnl|galGal2|chr19 (2949545-2949375) |
|
183-351, gnl|hg17|chr17 (4029761-4029949) |
|
183-351, gnl|Hg17|chr17 (4029933-4029764) |
|
183-351, gnl|mm7|chr11 (72836073-72835894) |
|
183-351, gnl|Mm7|chr11 (72835902-72836068) |
|
183-351, gnl|monDom2|scaffold_310 (51265-51094) |
|
183-351, gnl|oryCun1|scaffold_202586 (43434-43619) |
|
183-351, gnl|panTro1|chr19 (4333104-4333292) |
|
183-351, gnl|rheMac2|chr16 (3907955-3908142) |
|
183-351, gnl|rn3|chr10 (59653615-59653437) |
|
183-351, gnl|tetNig1|chr7 (1680712-1680552) |
|
183-351, gnl|xenTro1|scaffold_21 (2339157-2339326) |
