Non-Coding RNA Search

reep16c_c22.y1

Sequence:


               
               CTGGCCTTACCTGCTAGGGATATTGGGTAAGTCGGAGAAAGCTTTTGGTTCATTTAAAGC
CGTAGAATGTATACACATTTGGTGATACTGACCCTATATATCTGAAGGTTGATTTTATTT
ATGTATTATTTTTAATTTAAATTTTTTTTTTCTTGGCCGTGGCATGCAATGGCTTGATGT
GGGGGGGGGGGTCTCAGTTCTCAGACTAGGGATTAAACCTGGGCTGCAGTGATGAAAGTG
TTGAGTCTTAATCACTAGACCACCAGGGGACCCCAGGTTTTATTTTTTAAATGCCCTAGA
ATTTTGGTTTTCACTTTAGGGcagaggttggcaaactacgccttgcaggccaactcccac
cctctgcctgcttttgtaaataaggttttattgaagtgcagtctcactcatttactactg
tctatagctgctttcttcttataatggtagggttgagtagttgcaacagaccgaatggcc
cttaaaactgaaaatatttactatctggtcct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGCCTTACCTGCTAGGGATATTGGGTAAGTCGGAGAAAGCTTTTGGTTCATTTAAAGC
CGTAGAATGTATACACATTTGGTGATACTGACCCTATATATCTGAAGGTTGATTTTATTT
ATGTATTATTTTTAATTTAAATTTTTTTTTTCTTGGCCGTGGCATGCAATGGCTTGATGT
GGGGGGGGGGGTCTCAGTTCTCAGACTAGGGATTAAACCTGGGCTGCAGTGATGAAAGTG
TTGAGTCTTAATCACTAGACCACCAGGGGACCCCAGGTTTTATTTTTTAAATGCCCTAGA
ATTTTGGTTTTCACTTTAGGGcagaggttggcaaactacgccttgcaggccaactcccac
cctctgcctgcttttgtaaataaggttttattgaagtgcagtctcactcatttactactg
tctatagctgctttcttcttataatggtagggttgagtagttgcaacagaccgaatggcc
cttaaaactgaaaatatttactatctggtcct

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-120, gnl|bosTau2|chr2 (64731034-64730914)
               

               
               1-120, gnl|Hg17|chr2 (219429366-219429490)
               

               
               1-120, gnl|Mm7|chr1 (74920119-74920232)
               


               
               276-512, gnl|bosTau2|chr2 (64730923-64730687)
               

               
               276-512, gnl|Hg17|chr2 (219429481-219429720)
               

               
               276-512, gnl|Mm7|chr1 (74920226-74920458)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-120, gnl|bosTau2|chr2 (64731034-64730914)
               

               
               1-120, gnl|Hg17|chr2 (219429366-219429490)
               

               
               1-120, gnl|Mm7|chr1 (74920119-74920232)
               


               
               276-512, gnl|bosTau2|chr2 (64730923-64730687)
               

               
               276-512, gnl|Hg17|chr2 (219429481-219429720)
               

               
               276-512, gnl|Mm7|chr1 (74920226-74920458)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-120, gnl\|bosTau2\|chr2 (64731034-64730914)
	1-120, gnl\|Hg17\|chr2 (219429366-219429490)
	1-120, gnl\|Mm7\|chr1 (74920119-74920232)

	276-512, gnl\|bosTau2\|chr2 (64730923-64730687)
	276-512, gnl\|Hg17\|chr2 (219429481-219429720)
	276-512, gnl\|Mm7\|chr1 (74920226-74920458)