Non-Coding RNA Search

reep17c_d2.y1

Sequence:


               
               GTTGAACTGTATCCCAATGGGCTGCAGCGATCTTTCTTTGATGAAGAGGACCTGAATACT
ATTGCAGAGGGAGATAATGTGTATGCCTTCCAAGCCCCTCCATCACCTGGCCAGGAGATG
CTCTCAGCTTGTCCACCTGGCCTGCCCGTCTCCCCGCGCTTGGCTGCCCGTGAGGGTCAG
AGACTATCTCGGCCCGTCCTCGGCGAGAACAAGGTGCTAATCCTTTTCTGTAACTTGGTG
GGCTCAGGGCAGCAGGCCAGCAGGTATGTTTAACGTCCTCCTTCTTTTCCATGATATCTG
GGCTGTGTGGACATGTCCTTGGAATTTGGCCTAGAATAATTCTAATTTGCAAAAAATTAA
ATATCCATTCTCACGCTTGGTTGATCAATGAAGAATCGGCATTGGTACCTCCTGATCAAG
AGGATCAAAAATCATTGCTTAggagttcccgtcatggctccgtggttaacaaatccgact
aggaaccatgagattgcaggttcgatccctgggctcgctcagtgggttgaggatccagca
tcgccatgagctgtggtgtaggtcgcagacgtggctcggatcccgcgttgctgtggctct
ggcgt

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGAACTGTATCCCAATGGGCTGCAGCGATCTTTCTTTGATGAAGAGGACCTGAATACT
ATTGCAGAGGGAGATAATGTGTATGCCTTCCAAGCCCCTCCATCACCTGGCCAGGAGATG
CTCTCAGCTTGTCCACCTGGCCTGCCCGTCTCCCCGCGCTTGGCTGCCCGTGAGGGTCAG
AGACTATCTCGGCCCGTCCTCGGCGAGAACAAGGTGCTAATCCTTTTCTGTAACTTGGTG
GGCTCAGGGCAGCAGGCCAGCAGGTATGTTTAACGTCCTCCTTCTTTTCCATGATATCTG
GGCTGTGTGGACATGTCCTTGGAATTTGGCCTAGAATAATTCTAATTTGCAAAAAATTAA
ATATCCATTCTCACGCTTGGTTGATCAATGAAGAATCGGCATTGGTACCTCCTGATCAAG
AGGATCAAAAATCATTGCTTAggagttcccgtcatggctccgtggttaacaaatccgact
aggaaccatgagattgcaggttcgatccctgggctcgctcagtgggttgaggatccagca
tcgccatgagctgtggtgtaggtcgcagacgtggctcggatcccgcgttgctgtggctct
ggcgt

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               124-438, gnl|bosTau2|chr19 (21707653-21707965)
               

               
               124-438, gnl|Hg17|chr17 (9526860-9527158)
               

               
               124-438, gnl|Mm7|chr11 (67973055-67972523)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               124-438, gnl|bosTau2|chr19 (21707653-21707965)
               

               
               124-438, gnl|Hg17|chr17 (9526860-9527158)
               

               
               124-438, gnl|Mm7|chr11 (67973055-67972523)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	124-438, gnl\|bosTau2\|chr19 (21707653-21707965)
	124-438, gnl\|Hg17\|chr17 (9526860-9527158)
	124-438, gnl\|Mm7\|chr11 (67973055-67972523)