Non-Coding RNA Search

reep17c_h10.y1

Sequence:


               
               GCAGCCACGGGCGGCATCATCGACCCCCACAGGAACGAGAAGCTGACCGTGGACAGCGCC
ATCGCCCGGGACCTCATCGACTTCGATGACCGTCAGCAGATATACACCGCGGAGAAAGCC
GTCACTGGCTTCGATGACCCGTTCTCGGGCAAGACGGTGTCTGTGTCGGAGGCCATCAAG
AAAAACCTGATTGATCGGGAAACCGGCTTGCGACTGCTGGAGGCCCAGATCGCTTCCGGG
GGGGTGGTGGACCCCGTGAACAGCGTCTTCTTGCCCAAGGACGTGGCCTTGGCTCGTGGG
CTGATTGACAGAGATCTGTATCGGTCCCTGAACGACCCCCGGGACGGCCAGAAGAACTTC
GTGGATCCCGTCACCAAAAAGAAGGTCAGCTACATGCAGCTGAGGGAGCGGTGCCGGATC
GAACCCCACACCGGTCTGCTCCTGCTGTCCGTCCAGAAGAGAAGTATGTCCTTCCAAGGG
ATCAGACAGCCCGTCACCGTCTCTGAGCTGGTCGACTCTGGTATATTGAGACCCTCCACT
GTCAATGAACTGGAATCAGGTCAGATCTCTTACGACGAGGTGGGGGAGAGAATTAAGGAC
TTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCCACGGGCGGCATCATCGACCCCCACAGGAACGAGAAGCTGACCGTGGACAGCGCC
ATCGCCCGGGACCTCATCGACTTCGATGACCGTCAGCAGATATACACCGCGGAGAAAGCC
GTCACTGGCTTCGATGACCCGTTCTCGGGCAAGACGGTGTCTGTGTCGGAGGCCATCAAG
AAAAACCTGATTGATCGGGAAACCGGCTTGCGACTGCTGGAGGCCCAGATCGCTTCCGGG
GGGGTGGTGGACCCCGTGAACAGCGTCTTCTTGCCCAAGGACGTGGCCTTGGCTCGTGGG
CTGATTGACAGAGATCTGTATCGGTCCCTGAACGACCCCCGGGACGGCCAGAAGAACTTC
GTGGATCCCGTCACCAAAAAGAAGGTCAGCTACATGCAGCTGAGGGAGCGGTGCCGGATC
GAACCCCACACCGGTCTGCTCCTGCTGTCCGTCCAGAAGAGAAGTATGTCCTTCCAAGGG
ATCAGACAGCCCGTCACCGTCTCTGAGCTGGTCGACTCTGGTATATTGAGACCCTCCACT
GTCAATGAACTGGAATCAGGTCAGATCTCTTACGACGAGGTGGGGGAGAGAATTAAGGAC
TTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-447, gnl|bosTau2|chr14 (361438-360992)
               

               
               1-447, gnl|Hg17|chr8 (145014585-145014139)
               

               
               1-447, gnl|Mm7|chr15 (76186864-76186418)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-447, gnl|bosTau2|chr14 (361438-360992)
               

               
               1-447, gnl|Hg17|chr8 (145014585-145014139)
               

               
               1-447, gnl|Mm7|chr15 (76186864-76186418)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-447, gnl\|bosTau2\|chr14 (361438-360992)
	1-447, gnl\|Hg17\|chr8 (145014585-145014139)
	1-447, gnl\|Mm7\|chr15 (76186864-76186418)