Non-Coding RNA Search

reep19c_h14.y1

Sequence:


               
               TCCAGGAGACAAGTAAGTGGCTGGGCTTGGCCTGAGGGCCTGCCAGGGGCCCTGCCACTG
GCTACAAATTGAAACTCCTTTGTTTTCTGACTAGAGTGTGGCCTGAATTTTAACGAAGCA
ACCTTTTATTTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCCATCCTGTGTCC
CTCCTCTTGTCTCCCCTGTGACCCTCTCCCTTCCCTCCTCCTGTGTCACTGCAGATTGAG
ACCTACAGGCTGACGTTCCGGGCAAACGCCAGGGCCCGCACCGACCACGGGGCCGACATT
GTCTCCCGCCCCCCCCACTTCCCTGGCGGCCCCAGCTCAGGCCCCCGGGTGGCCGGCTCC
CTCTCCCAGGCAGCCCTCTAGGCCCTCCCCACTCCTGCCTTGCTTGCCACCCCCACACTC
CTTCCACTCCGAGCCACCCAGGCCCAGCTCCCTGCTTAGCTCCGATCCTCACCAACATCC
TCACCATTGCGCCATTGCACTGTGGAGAAGGTAGGGTGGGAAATGGGTGGGGGAGGCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAGGAGACAAGTAAGTGGCTGGGCTTGGCCTGAGGGCCTGCCAGGGGCCCTGCCACTG
GCTACAAATTGAAACTCCTTTGTTTTCTGACTAGAGTGTGGCCTGAATTTTAACGAAGCA
ACCTTTTATTTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCCATCCTGTGTCC
CTCCTCTTGTCTCCCCTGTGACCCTCTCCCTTCCCTCCTCCTGTGTCACTGCAGATTGAG
ACCTACAGGCTGACGTTCCGGGCAAACGCCAGGGCCCGCACCGACCACGGGGCCGACATT
GTCTCCCGCCCCCCCCACTTCCCTGGCGGCCCCAGCTCAGGCCCCCGGGTGGCCGGCTCC
CTCTCCCAGGCAGCCCTCTAGGCCCTCCCCACTCCTGCCTTGCTTGCCACCCCCACACTC
CTTCCACTCCGAGCCACCCAGGCCCAGCTCCCTGCTTAGCTCCGATCCTCACCAACATCC
TCACCATTGCGCCATTGCACTGTGGAGAAGGTAGGGTGGGAAATGGGTGGGGGAGGCTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               150-376, gnl|bosTau2|chr22 (40655442-40655213)
               

               
               150-376, gnl|Hg17|chr3 (47869520-47869291)
               

               
               150-376, gnl|Mm7|chr9 (109778607-109778841)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-376, gnl|bosTau2|chr22 (40655442-40655213)
               

               
               150-376, gnl|Hg17|chr3 (47869520-47869291)
               

               
               150-376, gnl|Mm7|chr9 (109778607-109778841)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	150-376, gnl\|bosTau2\|chr22 (40655442-40655213)
	150-376, gnl\|Hg17\|chr3 (47869520-47869291)
	150-376, gnl\|Mm7\|chr9 (109778607-109778841)