Non-Coding RNA Search

reep19c_n18.y1

Sequence:


               
               CGTGGCCTTTAAAGTGTGGTTCAGCCCTTTCCTCCTGGGGTGGTTGGTAAACACCGCTGA
GCTCGGGTATTCTCAGCCACTGAAAGAAGCATGAACTAGTGACTTGGAAAGGGAAACTTA
AGAAGTGATGCTTGCTTGGTTAAGAGTTAAGGGATTCCTGGCAGCAGAGTAAATAAAGCT
CATGGCCCACCAGCTAGAAAGTATCCTTGCCATGAAAAAGAGGACGTGATAAGTTGTTCA
ACTTATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATACAAGGACCTGTGGAATAT
GAGTGATGACAAACCCTTTCTATGTACTGCCCCTGGATGTGGCCAGCGTTTTACCAACGA
GGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACG
TAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACACGATTCTTGAAAAACTG
TGAAGAAGTGGGTTTGTTTAATGAGTTGGCAAGTCCATTTGAGAATGAATTCAAGAAGGC
CTCAGAAGACGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTGGCCTTTAAAGTGTGGTTCAGCCCTTTCCTCCTGGGGTGGTTGGTAAACACCGCTGA
GCTCGGGTATTCTCAGCCACTGAAAGAAGCATGAACTAGTGACTTGGAAAGGGAAACTTA
AGAAGTGATGCTTGCTTGGTTAAGAGTTAAGGGATTCCTGGCAGCAGAGTAAATAAAGCT
CATGGCCCACCAGCTAGAAAGTATCCTTGCCATGAAAAAGAGGACGTGATAAGTTGTTCA
ACTTATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATACAAGGACCTGTGGAATAT
GAGTGATGACAAACCCTTTCTATGTACTGCCCCTGGATGTGGCCAGCGTTTTACCAACGA
GGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACG
TAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACACGATTCTTGAAAAACTG
TGAAGAAGTGGGTTTGTTTAATGAGTTGGCAAGTCCATTTGAGAATGAATTCAAGAAGGC
CTCAGAAGACGACA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q53RY2_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q53RY2_HUMAN

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-112, gnl|bosTau2|chr2 (15150566-15150455)
               

               
               1-112, gnl|Hg17|chr2 (175858395-175858284)
               

               
               1-112, gnl|Mm7|chr2 (73736301-73736190)
               


               
               395-554, gnl|bosTau2|chr2 (15111460-15111306)
               

               
               395-554, gnl|Hg17|chr2 (175808648-175808494)
               

               
               395-554, gnl|Mm7|chr2 (73694746-73694588)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-112, gnl|bosTau2|chr2 (15150566-15150455)
               

               
               1-112, gnl|Hg17|chr2 (175858395-175858284)
               

               
               1-112, gnl|Mm7|chr2 (73736301-73736190)
               


               
               395-554, gnl|bosTau2|chr2 (15111460-15111306)
               

               
               395-554, gnl|Hg17|chr2 (175808648-175808494)
               

               
               395-554, gnl|Mm7|chr2 (73694746-73694588)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-112, gnl\|bosTau2\|chr2 (15150566-15150455)
	1-112, gnl\|Hg17\|chr2 (175858395-175858284)
	1-112, gnl\|Mm7\|chr2 (73736301-73736190)

	395-554, gnl\|bosTau2\|chr2 (15111460-15111306)
	395-554, gnl\|Hg17\|chr2 (175808648-175808494)
	395-554, gnl\|Mm7\|chr2 (73694746-73694588)