reep22c_b23.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCGGCTGGGCCGCACGGTTCGCCTGCAGTGCCCGGTGGAGGGGGACCCAGCGCCCCTGA CCATGTGGACCAAGGACGGCCGCACGATCCACGGCGGCTGGAGCCGCTTCCGCGTGCTGC CCCAGGGGCTGAAGGTGAAGGAGGTGGAGCGAGAGGACGCCGGCGCCTATGTGTGCAAGG CTACCAACGGCTTCGGCAGCCTCAGCGTCAACTACACCCTCATCGTGATGGATGACACCA GCCCAGGAAGGGAGAGCCCAGGGCTCGATGGCCCCTCTGGGGGCCAGGAAGACCCAGCCA GCAAGCAGTGGGCGCGGCCCCGCTTCACGCAGCCCTCCAAGATGAGGCGCCGGGTGATTG CGCGGCCGGTGGGCAGCTCCGTGCGACTCAAGTGCGTGGCCAGTGGGCACCCACGCCCTG ACATCATGTGGATGAAGGACGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCGGCTGGGCCGCACGGTTCGCCTGCAGTGCCCGGTGGAGGGGGACCCAGCGCCCCTGA CCATGTGGACCAAGGACGGCCGCACGATCCACGGCGGCTGGAGCCGCTTCCGCGTGCTGC CCCAGGGGCTGAAGGTGAAGGAGGTGGAGCGAGAGGACGCCGGCGCCTATGTGTGCAAGG CTACCAACGGCTTCGGCAGCCTCAGCGTCAACTACACCCTCATCGTGATGGATGACACCA GCCCAGGAAGGGAGAGCCCAGGGCTCGATGGCCCCTCTGGGGGCCAGGAAGACCCAGCCA GCAAGCAGTGGGCGCGGCCCCGCTTCACGCAGCCCTCCAAGATGAGGCGCCGGGTGATTG CGCGGCCGGTGGGCAGCTCCGTGCGACTCAAGTGCGTGGCCAGTGGGCACCCACGCCCTG ACATCATGTGGATGAAGGACGAC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 3-121, + strand, RNAz p=0.524963 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 3-121, + strand, RNAz p=0.524963 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC036769, + |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 3-231, gnl|bosTau2|chr6 (63525746-63525518) | |
| 3-231, gnl|danRer3|chrNA (221478012-221478226) | |
| 3-231, gnl|fr1|chrUn (32924922-32925137) | |
| 3-231, gnl|galGal2|chr4 (85282208-85281993) | |
| 3-231, gnl|hg17|chr4 (1005819-1006034) | |
| 3-231, gnl|Hg17|chr4 (1005865-1006093) | |
| 3-231, gnl|loxAfr1|scaffold_53463 (3974-4189) | |
| 3-231, gnl|mm7|chr5 (107884216-107884431) | |
| 3-231, gnl|Mm7|chr5 (107884262-107884490) | |
| 3-231, gnl|monDom2|scaffold_10 (47208711-47208496) | |
| 3-231, gnl|rheMac2|chr1 (2940235-2940020) | |
| 3-231, gnl|rn3|chr14 (1554576-1554361) | |
| 3-231, gnl|tetNig1|chr10 (5484183-5484398) | |
| 3-231, gnl|xenTro1|scaffold_149 (1537738-1537953) | |
| 312-443, gnl|bosTau2|chr6 (63524270-63524139) | |
| 312-443, gnl|canFam2|chr3 (94333298-94333165) | |
| 312-443, gnl|danRer3|chrNA (221528840-221528973) | |
| 312-443, gnl|echTel1|scaffold_237355 (2846-2713) | |
| 312-443, gnl|fr1|chrUn (32946829-32946964) | |
| 312-443, gnl|galGal2|chr4 (85226066-85225934) | |
| 312-443, gnl|hg17|chr4 (1007431-1007564) | |
| 312-443, gnl|Hg17|chr4 (1007434-1007565) | |
| 312-443, gnl|loxAfr1|scaffold_53463 (5836-5969) | |
| 312-443, gnl|mm7|chr5 (107885783-107885916) | |
| 312-443, gnl|Mm7|chr5 (107885786-107885917) | |
| 312-443, gnl|monDom2|scaffold_10 (47155217-47155084) | |
| 312-443, gnl|oryCun1|scaffold_187569 (4050-4183) | |
| 312-443, gnl|panTro1|chr3 (1088066-1088199) | |
| 312-443, gnl|rheMac2|chr1 (2938505-2938372) | |
| 312-443, gnl|rn3|chr14 (1553005-1552872) | |
| 312-443, gnl|tetNig1|chr1 (5716878-5717010) | |
| 312-443, gnl|xenTro1|scaffold_149 (1585722-1585855) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-231, gnl|bosTau2|chr6 (63525746-63525518) | |
| 3-231, gnl|danRer3|chrNA (221478012-221478226) | |
| 3-231, gnl|fr1|chrUn (32924922-32925137) | |
| 3-231, gnl|galGal2|chr4 (85282208-85281993) | |
| 3-231, gnl|hg17|chr4 (1005819-1006034) | |
| 3-231, gnl|Hg17|chr4 (1005865-1006093) | |
| 3-231, gnl|loxAfr1|scaffold_53463 (3974-4189) | |
| 3-231, gnl|mm7|chr5 (107884216-107884431) | |
| 3-231, gnl|Mm7|chr5 (107884262-107884490) | |
| 3-231, gnl|monDom2|scaffold_10 (47208711-47208496) | |
| 3-231, gnl|rheMac2|chr1 (2940235-2940020) | |
| 3-231, gnl|rn3|chr14 (1554576-1554361) | |
| 3-231, gnl|tetNig1|chr10 (5484183-5484398) | |
| 3-231, gnl|xenTro1|scaffold_149 (1537738-1537953) | |
| 312-443, gnl|bosTau2|chr6 (63524270-63524139) | |
| 312-443, gnl|canFam2|chr3 (94333298-94333165) | |
| 312-443, gnl|danRer3|chrNA (221528840-221528973) | |
| 312-443, gnl|echTel1|scaffold_237355 (2846-2713) | |
| 312-443, gnl|fr1|chrUn (32946829-32946964) | |
| 312-443, gnl|galGal2|chr4 (85226066-85225934) | |
| 312-443, gnl|hg17|chr4 (1007431-1007564) | |
| 312-443, gnl|Hg17|chr4 (1007434-1007565) | |
| 312-443, gnl|loxAfr1|scaffold_53463 (5836-5969) | |
| 312-443, gnl|mm7|chr5 (107885783-107885916) | |
| 312-443, gnl|Mm7|chr5 (107885786-107885917) | |
| 312-443, gnl|monDom2|scaffold_10 (47155217-47155084) | |
| 312-443, gnl|oryCun1|scaffold_187569 (4050-4183) | |
| 312-443, gnl|panTro1|chr3 (1088066-1088199) | |
| 312-443, gnl|rheMac2|chr1 (2938505-2938372) | |
| 312-443, gnl|rn3|chr14 (1553005-1552872) | |
| 312-443, gnl|tetNig1|chr1 (5716878-5717010) | |
| 312-443, gnl|xenTro1|scaffold_149 (1585722-1585855) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |