reep22c_i13.y1
|
CGGCCTATTACGACTGCCGCTTCCCGCAGAGCGTGGGCCGGAGCCATGCGCTGGTGTACG
GGCCCGGCGGCTCGGCGCCCGGCTTCCAGCACGCCTCGCACCACGTCCAAGACTTCTTCC
ACCACGGCACCTCGGGCATCTCCAACTCGGGCTACCAGCAGAACCCGTGCTCGCTGAGCT
GCCACGGAGACGCCTCCAAATTCTATGGCTACGAGGCGCTCCCCAGACAGTCCCTTTATG
GGGCTCAGCAAGAGGCGAGCGTGGTGCAATATCCCGACTGTAAATCCTCTGCCAACACTA
ACAGTAGCGAAGGACAAGGCCACTTAAATCAAAACTCGTCTCCCAGCCTCATGTTTCCAT
GGATGAGACCCCACGCTCCGGGGCGGCGCAGCGGAAGGCAAACTTACAGCCGGTATCAGA
CCTTGGAACTAGAAAAGGAGTTTCTCTTTAATCCTTATTTGACACGAAAGCGCCGGATTG
AAGTCTCTCACGCCCTGGGACTGACTGAGAGACAAGTGAAGATCTGGTTCCAGAACCGAA
G
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGGCCTATTACGACTGCCGCTTCCCGCAGAGCGTGGGCCGGAGCCATGCGCTGGTGTACG
GGCCCGGCGGCTCGGCGCCCGGCTTCCAGCACGCCTCGCACCACGTCCAAGACTTCTTCC
ACCACGGCACCTCGGGCATCTCCAACTCGGGCTACCAGCAGAACCCGTGCTCGCTGAGCT
GCCACGGAGACGCCTCCAAATTCTATGGCTACGAGGCGCTCCCCAGACAGTCCCTTTATG
GGGCTCAGCAAGAGGCGAGCGTGGTGCAATATCCCGACTGTAAATCCTCTGCCAACACTA
ACAGTAGCGAAGGACAAGGCCACTTAAATCAAAACTCGTCTCCCAGCCTCATGTTTCCAT
GGATGAGACCCCACGCTCCGGGGCGGCGCAGCGGAAGGCAAACTTACAGCCGGTATCAGA
CCTTGGAACTAGAAAAGGAGTTTCTCTTTAATCCTTATTTGACACGAAAGCGCCGGATTG
AAGTCTCTCACGCCCTGGGACTGACTGAGAGACAAGTGAAGATCTGGTTCCAGAACCGAA
G
|
|
gi|31753106|gb|AAH53898.1| |
Protein identifier
|
gi|31753106|gb|AAH53898.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
117-375, gnl|bosTau2|chr5 (16774359-16774101) |
|
117-375, gnl|canFam2|chr9 (28203738-28204031) |
|
117-375, gnl|danRer3|chr12 (26523987-26523721) |
|
117-375, gnl|dasNov1|scaffold_140926 (1022-1291) |
|
117-375, gnl|fr1|chrUn (163980283-163980010) |
|
117-375, gnl|galGal2|chr27 (2228047-2227758) |
|
117-375, gnl|Hg17|chr12 (52689513-52689771) |
|
117-375, gnl|hg17|chr17 (44046612-44046905) |
|
117-375, gnl|loxAfr1|scaffold_95422 (4771-4457) |
|
117-375, gnl|mm7|chr11 (96392462-96392164) |
|
117-375, gnl|Mm7|chr15 (102977113-102977371) |
|
117-375, gnl|oryCun1|scaffold_120480 (768-495) |
|
117-375, gnl|rheMac2|chr16 (32843658-32843951) |
|
117-375, gnl|rn3|chr10 (85028541-85028243) |
|
117-375, gnl|tetNig1|chrUn_random (38129980-38130253) |
|
117-375, gnl|xenTro1|scaffold_329 (583483-583761) |
| |
|
399-541, gnl|bosTau2|chr19 (31230408-31230266) |
|
399-541, gnl|Hg17|chr17 (44045844-44045702) |
|
399-541, gnl|Mm7|chr11 (96393228-96393370) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
117-375, gnl|bosTau2|chr5 (16774359-16774101) |
|
117-375, gnl|canFam2|chr9 (28203738-28204031) |
|
117-375, gnl|danRer3|chr12 (26523987-26523721) |
|
117-375, gnl|dasNov1|scaffold_140926 (1022-1291) |
|
117-375, gnl|fr1|chrUn (163980283-163980010) |
|
117-375, gnl|galGal2|chr27 (2228047-2227758) |
|
117-375, gnl|Hg17|chr12 (52689513-52689771) |
|
117-375, gnl|hg17|chr17 (44046612-44046905) |
|
117-375, gnl|loxAfr1|scaffold_95422 (4771-4457) |
|
117-375, gnl|mm7|chr11 (96392462-96392164) |
|
117-375, gnl|Mm7|chr15 (102977113-102977371) |
|
117-375, gnl|oryCun1|scaffold_120480 (768-495) |
|
117-375, gnl|rheMac2|chr16 (32843658-32843951) |
|
117-375, gnl|rn3|chr10 (85028541-85028243) |
|
117-375, gnl|tetNig1|chrUn_random (38129980-38130253) |
|
117-375, gnl|xenTro1|scaffold_329 (583483-583761) |
| |
|
399-541, gnl|bosTau2|chr19 (31230408-31230266) |
|
399-541, gnl|Hg17|chr17 (44045844-44045702) |
|
399-541, gnl|Mm7|chr11 (96393228-96393370) |
