Non-Coding RNA Search

reep22c_j13.y1

Sequence:


               
               GTGCCACGTCCCAAGCCTCTCGAGCTGCGGGGCCATGGCGGCCGCCGAGCCCAAGTCCCC
CGCGGCAGCCGGGGCGGCCGCGGCCCGGCGCCTGGCTCGAGGCTGCTGGTCCGCCTTCTG
GGACTACGAGACACCCAAGGTGATCGTGGTGAAGAACCGGCGCCTGGGCATCGTGTACCG
CACCGTGCAGTTGCTCATTCTGCTCTACTTCGTGTGGTACGTGTTCATCGTGCAGAAGAG
CTACCAGGACAGCGAGACCGGCCCGGAAAGCTCCGTCATCACCAAGGTCAAAGGTCTCAC
CTTGTCAGAGCACAAAGTGTGGGACGTGGAGGAGTACGTGAAACCCCCCGAGGGGGGCAG
CGTGTTCAGCATCATCACCAGGATCGAGGTCACCTCCTTCCAGACCCTCGGAACCTGCGC
GGAGAGTATGAGGGTCAGAAATGCCACCTGCGACTCGGACGAGGACTGCGTGGCTGGGCA
GCTGGATATGCTAGGAAACGGCCTGCGGACCGGGCGCTGCGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCACGTCCCAAGCCTCTCGAGCTGCGGGGCCATGGCGGCCGCCGAGCCCAAGTCCCC
CGCGGCAGCCGGGGCGGCCGCGGCCCGGCGCCTGGCTCGAGGCTGCTGGTCCGCCTTCTG
GGACTACGAGACACCCAAGGTGATCGTGGTGAAGAACCGGCGCCTGGGCATCGTGTACCG
CACCGTGCAGTTGCTCATTCTGCTCTACTTCGTGTGGTACGTGTTCATCGTGCAGAAGAG
CTACCAGGACAGCGAGACCGGCCCGGAAAGCTCCGTCATCACCAAGGTCAAAGGTCTCAC
CTTGTCAGAGCACAAAGTGTGGGACGTGGAGGAGTACGTGAAACCCCCCGAGGGGGGCAG
CGTGTTCAGCATCATCACCAGGATCGAGGTCACCTCCTTCCAGACCCTCGGAACCTGCGC
GGAGAGTATGAGGGTCAGAAATGCCACCTGCGACTCGGACGAGGACTGCGTGGCTGGGCA
GCTGGATATGCTAGGAAACGGCCTGCGGACCGGGCGCTGCGTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|3142694|gb|AAC16883.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3142694|gb|AAC16883.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               9-223, gnl|bosTau2|chr17 (23043759-23043966)
               

               
               9-223, gnl|Hg17|chr12 (131805708-131805949)
               

               
               9-223, gnl|Mm7|chr5 (109509512-109509300)
               


               
               348-473, gnl|bosTau2|chr17 (23044555-23044679)
               

               
               348-473, gnl|Hg17|chr12 (131806610-131806733)
               

               
               348-473, gnl|Mm7|chr5 (109508932-109508820)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-223, gnl|bosTau2|chr17 (23043759-23043966)
               

               
               9-223, gnl|Hg17|chr12 (131805708-131805949)
               

               
               9-223, gnl|Mm7|chr5 (109509512-109509300)
               


               
               348-473, gnl|bosTau2|chr17 (23044555-23044679)
               

               
               348-473, gnl|Hg17|chr12 (131806610-131806733)
               

               
               348-473, gnl|Mm7|chr5 (109508932-109508820)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	9-223, gnl\|bosTau2\|chr17 (23043759-23043966)
	9-223, gnl\|Hg17\|chr12 (131805708-131805949)
	9-223, gnl\|Mm7\|chr5 (109509512-109509300)

	348-473, gnl\|bosTau2\|chr17 (23044555-23044679)
	348-473, gnl\|Hg17\|chr12 (131806610-131806733)
	348-473, gnl\|Mm7\|chr5 (109508932-109508820)