Non-Coding RNA Search

reep22c_k11.y1

Sequence:


               
               GACGACTCTTGGAAGAATCCGCTCTCCGGCGTGTGTGCACAGCCGGAATCATGTCGAGTT
TGGCGGTGAGAGACCCGGCAATGGATCGATCACTGCGTTCCGTGTTCGTGGGGAACATTC
CGTATGAGGCAACTGAGGAGCAGTTAAAGGACATTTTCTCCGAGGTTGGTTCTGTTGTGA
GTTTCCGGCTGGTTTACGATAGAGAGACGGGAAAACCTAAGGGTTATGGCTTCTGTGAAT
ACCAAGACCAGGAGACCGCGCTTAGTGCCATGCGGAACCTTAATGGGCGGGAGTTCAGCG
GGAGAGCGCTTCGGGTGGACAATGCTGCCAGCGAAAAGAACAAGGAGGAGTTAAAGAGCT
TAGGGCCTGCAGCCCCCATCATTGACTCTCCCTATGGAGACCCCATCGATCCAGAAGACG
CCCCCGAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACGACTCTTGGAAGAATCCGCTCTCCGGCGTGTGTGCACAGCCGGAATCATGTCGAGTT
TGGCGGTGAGAGACCCGGCAATGGATCGATCACTGCGTTCCGTGTTCGTGGGGAACATTC
CGTATGAGGCAACTGAGGAGCAGTTAAAGGACATTTTCTCCGAGGTTGGTTCTGTTGTGA
GTTTCCGGCTGGTTTACGATAGAGAGACGGGAAAACCTAAGGGTTATGGCTTCTGTGAAT
ACCAAGACCAGGAGACCGCGCTTAGTGCCATGCGGAACCTTAATGGGCGGGAGTTCAGCG
GGAGAGCGCTTCGGGTGGACAATGCTGCCAGCGAAAAGAACAAGGAGGAGTTAAAGAGCT
TAGGGCCTGCAGCCCCCATCATTGACTCTCCCTATGGAGACCCCATCGATCCAGAAGACG
CCCCCGAATC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34810648|pdb|1P1T|A

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34810648|pdb|1P1T|A

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-430, gnl|bosTau2|chr26 (4404794-4404368)
               

               
               1-430, gnl|Hg17|chr10 (53129367-53128936)
               

               
               1-430, gnl|Mm7|chr19 (30782167-30782597)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-430, gnl|bosTau2|chr26 (4404794-4404368)
               

               
               1-430, gnl|Hg17|chr10 (53129367-53128936)
               

               
               1-430, gnl|Mm7|chr19 (30782167-30782597)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-430, gnl\|bosTau2\|chr26 (4404794-4404368)
	1-430, gnl\|Hg17\|chr10 (53129367-53128936)
	1-430, gnl\|Mm7\|chr19 (30782167-30782597)