Non-Coding RNA Search

reep24c_k14.y1

Sequence:


               
               GGAGTGAGCAGCTTGAGCCCTGGGTGGTGGGAGCTGCAGTGGTCCCTTCCTTGTCCGCGA
GTGTGGGAGCATCTGTGTGGGACCCTCCTGCCACAGGAAGGAGCGGGCAGAGCTGCCTTG
ACCTCTGGTCTTAGACGGGGTCGCAAGGCTGAGGCCACTGCCGCTGCCACTGCCTTTCCA
GGTCGTGTCTTATGCCAGGTTCCTGTACCCCACCAACGCCCTGGTCACACTCAAGCCAGA
CAGCCACGTTCCACCGCCTCAGCCCCGGCCCAGCATCCCCCGCACCCTGCTGGCGTCCAG
ATGCAAACCTGGCCCCCCCAGGGCGGCGCCTGCCGGCACGGAGCTAGTGACGCCCTGGCG
CTGGACGGGCTCTGGCTGAGGCCTGGGTCGGCACAAGCCGTTGAGCGGCGCTCTAGGCTC
ACGGTGGCTCAGAGCCACGCTCTGCTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGTGAGCAGCTTGAGCCCTGGGTGGTGGGAGCTGCAGTGGTCCCTTCCTTGTCCGCGA
GTGTGGGAGCATCTGTGTGGGACCCTCCTGCCACAGGAAGGAGCGGGCAGAGCTGCCTTG
ACCTCTGGTCTTAGACGGGGTCGCAAGGCTGAGGCCACTGCCGCTGCCACTGCCTTTCCA
GGTCGTGTCTTATGCCAGGTTCCTGTACCCCACCAACGCCCTGGTCACACTCAAGCCAGA
CAGCCACGTTCCACCGCCTCAGCCCCGGCCCAGCATCCCCCGCACCCTGCTGGCGTCCAG
ATGCAAACCTGGCCCCCCCAGGGCGGCGCCTGCCGGCACGGAGCTAGTGACGCCCTGGCG
CTGGACGGGCTCTGGCTGAGGCCTGGGTCGGCACAAGCCGTTGAGCGGCGCTCTAGGCTC
ACGGTGGCTCAGAGCCACGCTCTGCTTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               110-347, gnl|bosTau2|chr13 (35989381-35989611)
               

               
               110-347, gnl|Hg17|chr20 (60402119-60401891)
               

               
               110-347, gnl|Mm7|chr2 (180762660-180762429)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               110-347, gnl|bosTau2|chr13 (35989381-35989611)
               

               
               110-347, gnl|Hg17|chr20 (60402119-60401891)
               

               
               110-347, gnl|Mm7|chr2 (180762660-180762429)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	110-347, gnl\|bosTau2\|chr13 (35989381-35989611)
	110-347, gnl\|Hg17\|chr20 (60402119-60401891)
	110-347, gnl\|Mm7\|chr2 (180762660-180762429)