Non-Coding RNA Search

reep24c_p23.y1

Sequence:


               
               GTTTTTTTTTTCCCCCCCGAGAGCTCCGAAGACCATCTTTGTCCTGGTTCAGCCTCCCTC
TTGCGAACGCTTCCTCGGGTTCCTGTGGAAATGGGATGTCGGAATGATGAAAAGCCTCCC
AGACGTCTTTTAACCTGCAGTCAGTTATTATGTATAGAAGGTGAGCTAGTTTAACTTCTC
CCGAGATCGCTTTAACTTTGCTGAAGCCGAATTTCCCATGTGAGCTGCATTTTCTCTCTT
GAGCCCATCATCTCCCATTTCCCCCCTCACTTCTCCCAAAAGCTGTCATTCACTGATACA
AAACATTTAATCGTGAAATGACTGAGAATTGAGCCTTAACTTCAGATTAACTTGGGAGAA
TCAGGAAAATTCTCTTAACTGCATCACATCCTCTCAGACCAGGGCTAGAAAGGGGATTTC
AGGTTTCTCTGAGCCTCCCCACTTACCCCTAAAGTAGAACTTTTTAAAATTATGTCACCA
CCACTTGTAAAAATTTAGCAATATTCGAAGAAAATGCTCATGAAGTAAGAAATTCTGCTC
ATGGTTTTGCAAAGCAAATAGTCTCTTCAGGCACAAACCAGTGTCCTCCAATCACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTTTTTTCCCCCCCGAGAGCTCCGAAGACCATCTTTGTCCTGGTTCAGCCTCCCTC
TTGCGAACGCTTCCTCGGGTTCCTGTGGAAATGGGATGTCGGAATGATGAAAAGCCTCCC
AGACGTCTTTTAACCTGCAGTCAGTTATTATGTATAGAAGGTGAGCTAGTTTAACTTCTC
CCGAGATCGCTTTAACTTTGCTGAAGCCGAATTTCCCATGTGAGCTGCATTTTCTCTCTT
GAGCCCATCATCTCCCATTTCCCCCCTCACTTCTCCCAAAAGCTGTCATTCACTGATACA
AAACATTTAATCGTGAAATGACTGAGAATTGAGCCTTAACTTCAGATTAACTTGGGAGAA
TCAGGAAAATTCTCTTAACTGCATCACATCCTCTCAGACCAGGGCTAGAAAGGGGATTTC
AGGTTTCTCTGAGCCTCCCCACTTACCCCTAAAGTAGAACTTTTTAAAATTATGTCACCA
CCACTTGTAAAAATTTAGCAATATTCGAAGAAAATGCTCATGAAGTAAGAAATTCTGCTC
ATGGTTTTGCAAAGCAAATAGTCTCTTCAGGCACAAACCAGTGTCCTCCAATCACG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-589, gnl|bosTau2|chr11 (45662711-45662118)
               

               
               16-589, gnl|Hg17|chr2 (65451880-65451306)
               

               
               16-589, gnl|Mm7|chr11 (19973829-19974358)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-589, gnl|bosTau2|chr11 (45662711-45662118)
               

               
               16-589, gnl|Hg17|chr2 (65451880-65451306)
               

               
               16-589, gnl|Mm7|chr11 (19973829-19974358)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	16-589, gnl\|bosTau2\|chr11 (45662711-45662118)
	16-589, gnl\|Hg17\|chr2 (65451880-65451306)
	16-589, gnl\|Mm7\|chr11 (19973829-19974358)