reep27c_a8.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAGTTTCAGGATTACATCGAAGAAACCAAAACCTAAAGCGACAGAGGGATATATATTTT TTCCATTTTTTTTAATTTTCTTTTTTTCTGAGCGTGGCAAGCTTTTAAATTTTTTTTTTT TTTAAACCAGCCTCCCCCCATGAGGTAGCTAAGTGGGATTTCTGAGGAGGGCCTGCTCTG ACTTCATCTTGGCCCACCATCCACGATGAGGTTCTTCCTGCTTTGTGCCTACATGCTCCT GCTGATGATCCCTCAGTTGAGGGCAGTCAGCTTTCCTGAAGATGATGAACCCCTTAATAC TGTTGACTATCACTATTCAAGGCAATATCCGGTTTTTAGAGGACGCCCTTCAGGCAATGA ATCACAGCACAGGCTGGACTTTCAGCTGATGTTGAAAATTCGAGACACACTTTATATTGC TGGCAGGGATCAAGTTTATACGGTAAACTTAAATGAAATCCCCAAAACAGAAGTCGTACC AAACAAGAAACTGACATGGCGGTCAAGGCAACAGGATCGAGAAAACTGTGCTATGAAAGG CAAGCATAAAGATGAATGCCACAATTTTATTAAAGTATTTGTTCCAAGAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAGTTTCAGGATTACATCGAAGAAACCAAAACCTAAAGCGACAGAGGGATATATATTTT TTCCATTTTTTTTAATTTTCTTTTTTTCTGAGCGTGGCAAGCTTTTAAATTTTTTTTTTT TTTAAACCAGCCTCCCCCCATGAGGTAGCTAAGTGGGATTTCTGAGGAGGGCCTGCTCTG ACTTCATCTTGGCCCACCATCCACGATGAGGTTCTTCCTGCTTTGTGCCTACATGCTCCT GCTGATGATCCCTCAGTTGAGGGCAGTCAGCTTTCCTGAAGATGATGAACCCCTTAATAC TGTTGACTATCACTATTCAAGGCAATATCCGGTTTTTAGAGGACGCCCTTCAGGCAATGA ATCACAGCACAGGCTGGACTTTCAGCTGATGTTGAAAATTCGAGACACACTTTATATTGC TGGCAGGGATCAAGTTTATACGGTAAACTTAAATGAAATCCCCAAAACAGAAGTCGTACC AAACAAGAAACTGACATGGCGGTCAAGGCAACAGGATCGAGAAAACTGTGCTATGAAAGG CAAGCATAAAGATGAATGCCACAATTTTATTAAAGTATTTGTTCCAAGAAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 143-314, gnl|bosTau2|chr10 (43505489-43505324) | |
| 143-314, gnl|Hg17|chr15 (45839232-45839396) | |
| 143-314, gnl|Mm7|chr2 (124394432-124394596) | |
| 315-427, gnl|bosTau2|chr10 (43504930-43504818) | |
| 315-427, gnl|canFam2|chr30 (17035738-17035879) | |
| 315-427, gnl|danRer3|chr18 (43266188-43266058) | |
| 315-427, gnl|dasNov1|scaffold_423 (96812-96671) | |
| 315-427, gnl|echTel1|scaffold_316074 (39221-39080) | |
| 315-427, gnl|fr1|chrUn (65192900-65192770) | |
| 315-427, gnl|galGal2|chr10 (10464236-10464377) | |
| 315-427, gnl|hg17|chr15 (45839779-45839920) | |
| 315-427, gnl|Hg17|chr15 (45839793-45839905) | |
| 315-427, gnl|loxAfr1|scaffold_33905 (7667-7808) | |
| 315-427, gnl|mm7|chr2 (124394986-124395127) | |
| 315-427, gnl|Mm7|chr2 (124395000-124395112) | |
| 315-427, gnl|monDom2|scaffold_12 (22368158-22368017) | |
| 315-427, gnl|oryCun1|scaffold_121481 (4285-4426) | |
| 315-427, gnl|panTro1|chr16 (45812388-45812529) | |
| 315-427, gnl|rheMac2|chr7 (26078247-26078388) | |
| 315-427, gnl|rn3|chr3 (111840364-111840505) | |
| 315-427, gnl|tetNig1|chr5 (10008526-10008674) | |
| 315-427, gnl|xenTro1|scaffold_27 (2414294-2414435) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 143-314, gnl|bosTau2|chr10 (43505489-43505324) | |
| 143-314, gnl|Hg17|chr15 (45839232-45839396) | |
| 143-314, gnl|Mm7|chr2 (124394432-124394596) | |
| 315-427, gnl|bosTau2|chr10 (43504930-43504818) | |
| 315-427, gnl|canFam2|chr30 (17035738-17035879) | |
| 315-427, gnl|danRer3|chr18 (43266188-43266058) | |
| 315-427, gnl|dasNov1|scaffold_423 (96812-96671) | |
| 315-427, gnl|echTel1|scaffold_316074 (39221-39080) | |
| 315-427, gnl|fr1|chrUn (65192900-65192770) | |
| 315-427, gnl|galGal2|chr10 (10464236-10464377) | |
| 315-427, gnl|hg17|chr15 (45839779-45839920) | |
| 315-427, gnl|Hg17|chr15 (45839793-45839905) | |
| 315-427, gnl|loxAfr1|scaffold_33905 (7667-7808) | |
| 315-427, gnl|mm7|chr2 (124394986-124395127) | |
| 315-427, gnl|Mm7|chr2 (124395000-124395112) | |
| 315-427, gnl|monDom2|scaffold_12 (22368158-22368017) | |
| 315-427, gnl|oryCun1|scaffold_121481 (4285-4426) | |
| 315-427, gnl|panTro1|chr16 (45812388-45812529) | |
| 315-427, gnl|rheMac2|chr7 (26078247-26078388) | |
| 315-427, gnl|rn3|chr3 (111840364-111840505) | |
| 315-427, gnl|tetNig1|chr5 (10008526-10008674) | |
| 315-427, gnl|xenTro1|scaffold_27 (2414294-2414435) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |