Non-Coding RNA Search

reep27c_m14.y1

Sequence:


               
               TCAGCCTTCTGCAACAGGCCTCATCAGCTTTGGATGAGACTCGGACTGCCTACATCCTCC
AGGCAGTCGAGAGTGCATGGGAAGGGGTGGACCGACGGAAAGCCACCGATGCCAGAAGCC
CACCAGCGGCTGAGAATCCTAACGGGGTCGTGGAGACTGCTGAGCCAGAGAACTCCGAGG
GAGAGGAGTGCCTGGGAGCAGCTGCGGCCCCAGCCCCTGCCGTGTGTGGCGTGGAGCTGG
ACTCACTCATCTCCCAAGTGAAGGACCTGCTGCCAGAGCTCGGGGAGGGCTTCATCCTGG
CCTGCCTAGAGCACTACAGCTACGACCCAGAGCAGGTGATCAACAACGTCCTGGAGAGCC
GCCTGGCCCCTGCCCTCAGCCAGCTGGATCGCAGCCTAGACAGACAGGTGAAGCCAGACC
CGACACCTCTGCTGACATCTCGTCACAACGTCTTCCAGAATGATGAGTTTGACGTGTTCA
GCCGGGACTCAGTGGACCTGAGCCGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGCCTTCTGCAACAGGCCTCATCAGCTTTGGATGAGACTCGGACTGCCTACATCCTCC
AGGCAGTCGAGAGTGCATGGGAAGGGGTGGACCGACGGAAAGCCACCGATGCCAGAAGCC
CACCAGCGGCTGAGAATCCTAACGGGGTCGTGGAGACTGCTGAGCCAGAGAACTCCGAGG
GAGAGGAGTGCCTGGGAGCAGCTGCGGCCCCAGCCCCTGCCGTGTGTGGCGTGGAGCTGG
ACTCACTCATCTCCCAAGTGAAGGACCTGCTGCCAGAGCTCGGGGAGGGCTTCATCCTGG
CCTGCCTAGAGCACTACAGCTACGACCCAGAGCAGGTGATCAACAACGTCCTGGAGAGCC
GCCTGGCCCCTGCCCTCAGCCAGCTGGATCGCAGCCTAGACAGACAGGTGAAGCCAGACC
CGACACCTCTGCTGACATCTCGTCACAACGTCTTCCAGAATGATGAGTTTGACGTGTTCA
GCCGGGACTCAGTGGACCTGAGCCGGGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               187-413, gnl|bosTau2|chr17 (41661710-41661484)
               

               
               187-413, gnl|Hg17|chr22 (28522753-28522527)
               

               
               187-413, gnl|Mm7|chr11 (4624284-4624510)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               187-413, gnl|bosTau2|chr17 (41661710-41661484)
               

               
               187-413, gnl|Hg17|chr22 (28522753-28522527)
               

               
               187-413, gnl|Mm7|chr11 (4624284-4624510)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	187-413, gnl\|bosTau2\|chr17 (41661710-41661484)
	187-413, gnl\|Hg17\|chr22 (28522753-28522527)
	187-413, gnl\|Mm7\|chr11 (4624284-4624510)