reep30c_i5.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGATCAGCTTCAATTCACAGAACAGAATCTAGATGAGTCTTTAATAAGAAAAAAATGTG AAAGGATGGTCAAGGCCATTGAAGTTTTGTTAACTCTGTGTGGAGATGATACTCTAAAAA TGCATATTGCAAAAATTCTGACTACTATCAAATGTACCACTCTGATAGAACAACAGTTTA CATATGGCAAGATTGATCTGGGGTTTGGAACAAAGGTAGCAGATTCTGAGTTGTGCAAAC TTGCTGCTGATGTAATTTTGAAAACCCTTAATTTGATGAACAAACTTAAACACTTGGTTC CTGGTATGGAAGTAAGCTTCTACAAAATCCTTCAGGATCCTCGCCTGATTACTCCTTTGG CTTTTGCTTTAACATCAGATAATAGAGAACAAGTACAGTCTGGATTGGGAATATTATTGG AAGCTGCTCCACTGCCAGATTTTCCGGCCTTAGTACTTGGAGAAAGTATAGCAGCAAACA ATGCCTATAGGCAACAGGAAACAGAACATATGCCCAGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGATCAGCTTCAATTCACAGAACAGAATCTAGATGAGTCTTTAATAAGAAAAAAATGTG AAAGGATGGTCAAGGCCATTGAAGTTTTGTTAACTCTGTGTGGAGATGATACTCTAAAAA TGCATATTGCAAAAATTCTGACTACTATCAAATGTACCACTCTGATAGAACAACAGTTTA CATATGGCAAGATTGATCTGGGGTTTGGAACAAAGGTAGCAGATTCTGAGTTGTGCAAAC TTGCTGCTGATGTAATTTTGAAAACCCTTAATTTGATGAACAAACTTAAACACTTGGTTC CTGGTATGGAAGTAAGCTTCTACAAAATCCTTCAGGATCCTCGCCTGATTACTCCTTTGG CTTTTGCTTTAACATCAGATAATAGAGAACAAGTACAGTCTGGATTGGGAATATTATTGG AAGCTGCTCCACTGCCAGATTTTCCGGCCTTAGTACTTGGAGAAAGTATAGCAGCAAACA ATGCCTATAGGCAACAGGAAACAGAACATATGCCCAGAAG |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 90-235, gnl|bosTau2|chr1 (28395323-28395469) | |
| 90-235, gnl|canFam2|chr33 (16866525-16866735) | |
| 90-235, gnl|dasNov1|scaffold_14654 (43884-43679) | |
| 90-235, gnl|echTel1|scaffold_304142 (9834-9643) | |
| 90-235, gnl|galGal2|chr1 (81586527-81586706) | |
| 90-235, gnl|hg17|chr3 (109768020-109768212) | |
| 90-235, gnl|Hg17|chr3 (109768180-109768034) | |
| 90-235, gnl|loxAfr1|scaffold_15726 (2430-2290) | |
| 90-235, gnl|mm7|chr16 (48767930-48767737) | |
| 90-235, gnl|Mm7|chr16 (48767768-48767914) | |
| 90-235, gnl|monDom2|scaffold_24 (1394368-1394564) | |
| 90-235, gnl|oryCun1|scaffold_199629 (64982-64781) | |
| 90-235, gnl|panTro1|chr2 (111276945-111277137) | |
| 90-235, gnl|rheMac2|chr2 (28676142-28676333) | |
| 90-235, gnl|rn3|chr11 (53107530-53107721) | |
| 90-235, gnl|xenTro1|scaffold_60 (1636386-1636580) | |
| 334-454, gnl|bosTau2|chr1 (28398561-28398681) | |
| 334-454, gnl|canFam2|chr33 (16863790-16863960) | |
| 334-454, gnl|danRer3|chr24 (23148256-23148385) | |
| 334-454, gnl|dasNov1|scaffold_14654 (47266-47087) | |
| 334-454, gnl|echTel1|scaffold_309250 (59837-59661) | |
| 334-454, gnl|fr1|chrUn (319472768-319472613) | |
| 334-454, gnl|galGal2|chr1 (81584761-81584937) | |
| 334-454, gnl|hg17|chr3 (109764659-109764829) | |
| 334-454, gnl|Hg17|chr3 (109764783-109764663) | |
| 334-454, gnl|loxAfr1|scaffold_21588 (41057-40869) | |
| 334-454, gnl|mm7|chr16 (48771556-48771388) | |
| 334-454, gnl|Mm7|chr16 (48771430-48771550) | |
| 334-454, gnl|monDom2|scaffold_24 (1388411-1388618) | |
| 334-454, gnl|oryCun1|scaffold_199629 (68616-68446) | |
| 334-454, gnl|panTro1|chr2 (111273582-111273752) | |
| 334-454, gnl|rheMac2|chr2 (28672777-28672947) | |
| 334-454, gnl|rn3|chr11 (53103039-53103210) | |
| 334-454, gnl|xenTro1|scaffold_60 (1635568-1635727) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 90-235, gnl|bosTau2|chr1 (28395323-28395469) | |
| 90-235, gnl|canFam2|chr33 (16866525-16866735) | |
| 90-235, gnl|dasNov1|scaffold_14654 (43884-43679) | |
| 90-235, gnl|echTel1|scaffold_304142 (9834-9643) | |
| 90-235, gnl|galGal2|chr1 (81586527-81586706) | |
| 90-235, gnl|hg17|chr3 (109768020-109768212) | |
| 90-235, gnl|Hg17|chr3 (109768180-109768034) | |
| 90-235, gnl|loxAfr1|scaffold_15726 (2430-2290) | |
| 90-235, gnl|mm7|chr16 (48767930-48767737) | |
| 90-235, gnl|Mm7|chr16 (48767768-48767914) | |
| 90-235, gnl|monDom2|scaffold_24 (1394368-1394564) | |
| 90-235, gnl|oryCun1|scaffold_199629 (64982-64781) | |
| 90-235, gnl|panTro1|chr2 (111276945-111277137) | |
| 90-235, gnl|rheMac2|chr2 (28676142-28676333) | |
| 90-235, gnl|rn3|chr11 (53107530-53107721) | |
| 90-235, gnl|xenTro1|scaffold_60 (1636386-1636580) | |
| 334-454, gnl|bosTau2|chr1 (28398561-28398681) | |
| 334-454, gnl|canFam2|chr33 (16863790-16863960) | |
| 334-454, gnl|danRer3|chr24 (23148256-23148385) | |
| 334-454, gnl|dasNov1|scaffold_14654 (47266-47087) | |
| 334-454, gnl|echTel1|scaffold_309250 (59837-59661) | |
| 334-454, gnl|fr1|chrUn (319472768-319472613) | |
| 334-454, gnl|galGal2|chr1 (81584761-81584937) | |
| 334-454, gnl|hg17|chr3 (109764659-109764829) | |
| 334-454, gnl|Hg17|chr3 (109764783-109764663) | |
| 334-454, gnl|loxAfr1|scaffold_21588 (41057-40869) | |
| 334-454, gnl|mm7|chr16 (48771556-48771388) | |
| 334-454, gnl|Mm7|chr16 (48771430-48771550) | |
| 334-454, gnl|monDom2|scaffold_24 (1388411-1388618) | |
| 334-454, gnl|oryCun1|scaffold_199629 (68616-68446) | |
| 334-454, gnl|panTro1|chr2 (111273582-111273752) | |
| 334-454, gnl|rheMac2|chr2 (28672777-28672947) | |
| 334-454, gnl|rn3|chr11 (53103039-53103210) | |
| 334-454, gnl|xenTro1|scaffold_60 (1635568-1635727) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |