Non-Coding RNA Search

reep30c_p19.y1

Sequence:


               
               CACAAACTGTACAGAGAAGTGAAGGCAGGATTATGTTCTCATGAAAAAGTGGAACTTGTC
TTTATTTTATGAACACAGAGAGAGCAGGGATTCCTTAGAAGAAGTTCCTATCATGCCCTA
AAGTTCTGTGATGTCTATTTAACACATTTTAAATGATGGGGCTCAGTCTGTCTTGAACAT
TTCAGCTCAGCGCACCGGTCTGTGTATTTTCAAAGTTATCCCTTTAAATAAGAGAGATTT
TCAGTAGGAAAAAGACGTAGTTCTAGACCTTGCCGATGAACAATGAGATTTTTGGTTGCT
GGGAATGTCCCGTGTCCCTGTATAAACTGGTCGGTCACTCCATCAGTATTTCTCTGGAGT
TCGAACGAGGCGTTAGTTTCTGGCCTCCCTAAATTTCGGGTCACCTGTCTGCTGACACAT
GAATTCCAGATGTCGTCTCTGGCCCGCGTGCTGCGGTCGTTTAGGGTTTCGTTGTTTTTT
CTCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAAACTGTACAGAGAAGTGAAGGCAGGATTATGTTCTCATGAAAAAGTGGAACTTGTC
TTTATTTTATGAACACAGAGAGAGCAGGGATTCCTTAGAAGAAGTTCCTATCATGCCCTA
AAGTTCTGTGATGTCTATTTAACACATTTTAAATGATGGGGCTCAGTCTGTCTTGAACAT
TTCAGCTCAGCGCACCGGTCTGTGTATTTTCAAAGTTATCCCTTTAAATAAGAGAGATTT
TCAGTAGGAAAAAGACGTAGTTCTAGACCTTGCCGATGAACAATGAGATTTTTGGTTGCT
GGGAATGTCCCGTGTCCCTGTATAAACTGGTCGGTCACTCCATCAGTATTTCTCTGGAGT
TCGAACGAGGCGTTAGTTTCTGGCCTCCCTAAATTTCGGGTCACCTGTCTGCTGACACAT
GAATTCCAGATGTCGTCTCTGGCCCGCGTGCTGCGGTCGTTTAGGGTTTCGTTGTTTTTT
CTCTCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-469, gnl|bosTau2|chr3 (83850980-83850520)
               

               
               1-469, gnl|Hg17|chr2 (238025995-238025568)
               

               
               1-469, gnl|Mm7|chr1 (90678187-90677744)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-469, gnl|bosTau2|chr3 (83850980-83850520)
               

               
               1-469, gnl|Hg17|chr2 (238025995-238025568)
               

               
               1-469, gnl|Mm7|chr1 (90678187-90677744)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-469, gnl\|bosTau2\|chr3 (83850980-83850520)
	1-469, gnl\|Hg17\|chr2 (238025995-238025568)
	1-469, gnl\|Mm7\|chr1 (90678187-90677744)