reep32c_f19.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAGTGTCGGCACTGTGGGAAGGGCTTCCAGCAGAAGTTCACCTTCCACAGCAAGGAGAT CGTGGCCATCAGCTGCTCCTGGTGCAAGCAAGCATACCACAGCAAGGTGTCCTGCTTCAT GCTGCAGCAGATCGAGGAGCCCTGCTCCCTGGGGGTGCATGCCGCCGTGGTCATCCCCCC CACCTGGATCCTCCGTGCCCGCAGGCCCCAGAATACCCTCAAGGCAAGCAAGAAGAAAAA GAGGGCATCCTTCAAGAGGAAATCTAGCAAGAAAGGGCCCGAGGAGGGCCGCTGGAGACC CTTCATCATCAGGCCCACCCCGTCGCCCCTCATGAAGCCCCTGCTGGTATTTGTGAACCC CAAGAGTGGAGGCAACCAGGGCGCCAAGATCATCCAGTCCTTCCTCTGGTATCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAGTGTCGGCACTGTGGGAAGGGCTTCCAGCAGAAGTTCACCTTCCACAGCAAGGAGAT CGTGGCCATCAGCTGCTCCTGGTGCAAGCAAGCATACCACAGCAAGGTGTCCTGCTTCAT GCTGCAGCAGATCGAGGAGCCCTGCTCCCTGGGGGTGCATGCCGCCGTGGTCATCCCCCC CACCTGGATCCTCCGTGCCCGCAGGCCCCAGAATACCCTCAAGGCAAGCAAGAAGAAAAA GAGGGCATCCTTCAAGAGGAAATCTAGCAAGAAAGGGCCCGAGGAGGGCCGCTGGAGACC CTTCATCATCAGGCCCACCCCGTCGCCCCTCATGAAGCCCCTGCTGGTATTTGTGAACCC CAAGAGTGGAGGCAACCAGGGCGCCAAGATCATCCAGTCCTTCCTCTGGTATCTCA |
| Aligned organism(s): 70 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
| 95-211, gnl|bosTau2|chr15 (48626482-48626366) | |
| 95-211, gnl|canFam2|chr18 (46130292-46130204) | |
| 95-211, gnl|canFam2|chr18 (46130295-46130204) | |
| 95-211, gnl|danRer3|chr16 (50298297-50298387) | |
| 95-211, gnl|danRer3|chrUn (127991618-127991532) | |
| 95-211, gnl|dasNov1|scaffold_450 (228280-228192) | |
| 95-211, gnl|dasNov1|scaffold_450 (228285-228192) | |
| 95-211, gnl|echTel1|scaffold_241666 (3689-3777) | |
| 95-211, gnl|echTel1|scaffold_241666 (3686-3777) | |
| 95-211, gnl|fr1|chrUn (156299905-156299993) | |
| 95-211, gnl|fr1|chrUn (156299901-156299993) | |
| 95-211, gnl|galGal2|chr5 (20952856-20952768) | |
| 95-211, gnl|galGal2|chr5 (20952866-20952768) | |
| 95-211, gnl|hg17|chr11 (46349610-46349702) | |
| 95-211, gnl|Hg17|chr11 (46349613-46349729) | |
| 95-211, gnl|hg17|chr13 (43441203-43441291) | |
| 95-211, gnl|loxAfr1|scaffold_80 (261971-261883) | |
| 95-211, gnl|loxAfr1|scaffold_80 (261974-261883) | |
| 95-211, gnl|mm7|chr2 (91791591-91791503) | |
| 95-211, gnl|mm7|chr2 (91791596-91791503) | |
| 95-211, gnl|Mm7|chr2 (91791590-91791474) | |
| 95-211, gnl|monDom2|scaffold_971 (10839-10927) | |
| 95-211, gnl|monDom2|scaffold_971 (10833-10927) | |
| 95-211, gnl|oryCun1|scaffold_187674 (58712-58627) | |
| 95-211, gnl|oryCun1|scaffold_187674 (58719-58627) | |
| 95-211, gnl|panTro1|chr9 (46859653-46859741) | |
| 95-211, gnl|panTro1|chr9 (46859649-46859741) | |
| 95-211, gnl|rheMac2|chr14 (25755456-25755368) | |
| 95-211, gnl|rheMac2|chr14 (25755460-25755368) | |
| 95-211, gnl|rn3|chr3 (76217137-76217049) | |
| 95-211, gnl|rn3|chr3 (76217142-76217049) | |
| 95-211, gnl|tetNig1|chr13 (11259632-11259720) | |
| 95-211, gnl|tetNig1|chr13 (11259628-11259720) | |
| 95-211, gnl|xenTro1|scaffold_76 (1892371-1892459) | |
| 95-211, gnl|xenTro1|scaffold_76 (1892368-1892459) | |
| 279-408, gnl|bosTau2|chr15 (48625912-48625786) | |
| 279-408, gnl|canFam2|chr18 (46129786-46129691) | |
| 279-408, gnl|canFam2|chr18 (46129797-46129688) | |
| 279-408, gnl|danRer3|chr16 (50299774-50299883) | |
| 279-408, gnl|danRer3|chrUn (127990501-127990418) | |
| 279-408, gnl|dasNov1|scaffold_35907 (34115-34204) | |
| 279-408, gnl|dasNov1|scaffold_35907 (34105-34207) | |
| 279-408, gnl|echTel1|scaffold_241666 (4167-4258) | |
| 279-408, gnl|echTel1|scaffold_241666 (4155-4265) | |
| 279-408, gnl|fr1|chrUn (156300500-156300594) | |
| 279-408, gnl|fr1|chrUn (156300480-156300598) | |
| 279-408, gnl|galGal2|chr5 (20952213-20952123) | |
| 279-408, gnl|galGal2|chr5 (20952233-20952117) | |
| 279-408, gnl|hg17|chr11 (46350189-46350301) | |
| 279-408, gnl|Hg17|chr11 (46350196-46350322) | |
| 279-408, gnl|hg17|chr13 (43441393-43441488) | |
| 279-408, gnl|loxAfr1|scaffold_80 (261379-261284) | |
| 279-408, gnl|loxAfr1|scaffold_80 (261390-261281) | |
| 279-408, gnl|mm7|chr2 (91791059-91790964) | |
| 279-408, gnl|mm7|chr2 (91791070-91790961) | |
| 279-408, gnl|Mm7|chr2 (91791064-91790937) | |
| 279-408, gnl|monDom2|scaffold_971 (11102-11303) | |
| 279-408, gnl|monDom2|scaffold_971 (11199-11311) | |
| 279-408, gnl|oryCun1|scaffold_187674 (47437-47348) | |
| 279-408, gnl|oryCun1|scaffold_187674 (47429-47345) | |
| 279-408, gnl|panTro1|chr9 (46860242-46860332) | |
| 279-408, gnl|panTro1|chr9 (46860228-46860340) | |
| 279-408, gnl|rheMac2|chr14 (25754867-25754772) | |
| 279-408, gnl|rheMac2|chr14 (25754881-25754769) | |
| 279-408, gnl|rn3|chr3 (76216604-76216509) | |
| 279-408, gnl|rn3|chr3 (76216615-76216506) | |
| 279-408, gnl|tetNig1|chr13 (11260265-11260357) | |
| 279-408, gnl|tetNig1|chr13 (11260245-11260363) | |
| 279-408, gnl|xenTro1|scaffold_76 (1892768-1892855) | |
| 279-408, gnl|xenTro1|scaffold_76 (1892752-1892862) |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 95-211, gnl|bosTau2|chr15 (48626482-48626366) | |
| 95-211, gnl|canFam2|chr18 (46130292-46130204) | |
| 95-211, gnl|canFam2|chr18 (46130295-46130204) | |
| 95-211, gnl|danRer3|chr16 (50298297-50298387) | |
| 95-211, gnl|danRer3|chrUn (127991618-127991532) | |
| 95-211, gnl|dasNov1|scaffold_450 (228280-228192) | |
| 95-211, gnl|dasNov1|scaffold_450 (228285-228192) | |
| 95-211, gnl|echTel1|scaffold_241666 (3689-3777) | |
| 95-211, gnl|echTel1|scaffold_241666 (3686-3777) | |
| 95-211, gnl|fr1|chrUn (156299905-156299993) | |
| 95-211, gnl|fr1|chrUn (156299901-156299993) | |
| 95-211, gnl|galGal2|chr5 (20952856-20952768) | |
| 95-211, gnl|galGal2|chr5 (20952866-20952768) | |
| 95-211, gnl|hg17|chr11 (46349610-46349702) | |
| 95-211, gnl|Hg17|chr11 (46349613-46349729) | |
| 95-211, gnl|hg17|chr13 (43441203-43441291) | |
| 95-211, gnl|loxAfr1|scaffold_80 (261971-261883) | |
| 95-211, gnl|loxAfr1|scaffold_80 (261974-261883) | |
| 95-211, gnl|mm7|chr2 (91791591-91791503) | |
| 95-211, gnl|mm7|chr2 (91791596-91791503) | |
| 95-211, gnl|Mm7|chr2 (91791590-91791474) | |
| 95-211, gnl|monDom2|scaffold_971 (10839-10927) | |
| 95-211, gnl|monDom2|scaffold_971 (10833-10927) | |
| 95-211, gnl|oryCun1|scaffold_187674 (58712-58627) | |
| 95-211, gnl|oryCun1|scaffold_187674 (58719-58627) | |
| 95-211, gnl|panTro1|chr9 (46859653-46859741) | |
| 95-211, gnl|panTro1|chr9 (46859649-46859741) | |
| 95-211, gnl|rheMac2|chr14 (25755456-25755368) | |
| 95-211, gnl|rheMac2|chr14 (25755460-25755368) | |
| 95-211, gnl|rn3|chr3 (76217137-76217049) | |
| 95-211, gnl|rn3|chr3 (76217142-76217049) | |
| 95-211, gnl|tetNig1|chr13 (11259632-11259720) | |
| 95-211, gnl|tetNig1|chr13 (11259628-11259720) | |
| 95-211, gnl|xenTro1|scaffold_76 (1892371-1892459) | |
| 95-211, gnl|xenTro1|scaffold_76 (1892368-1892459) | |
| 279-408, gnl|bosTau2|chr15 (48625912-48625786) | |
| 279-408, gnl|canFam2|chr18 (46129786-46129691) | |
| 279-408, gnl|canFam2|chr18 (46129797-46129688) | |
| 279-408, gnl|danRer3|chr16 (50299774-50299883) | |
| 279-408, gnl|danRer3|chrUn (127990501-127990418) | |
| 279-408, gnl|dasNov1|scaffold_35907 (34115-34204) | |
| 279-408, gnl|dasNov1|scaffold_35907 (34105-34207) | |
| 279-408, gnl|echTel1|scaffold_241666 (4167-4258) | |
| 279-408, gnl|echTel1|scaffold_241666 (4155-4265) | |
| 279-408, gnl|fr1|chrUn (156300500-156300594) | |
| 279-408, gnl|fr1|chrUn (156300480-156300598) | |
| 279-408, gnl|galGal2|chr5 (20952213-20952123) | |
| 279-408, gnl|galGal2|chr5 (20952233-20952117) | |
| 279-408, gnl|hg17|chr11 (46350189-46350301) | |
| 279-408, gnl|Hg17|chr11 (46350196-46350322) | |
| 279-408, gnl|hg17|chr13 (43441393-43441488) | |
| 279-408, gnl|loxAfr1|scaffold_80 (261379-261284) | |
| 279-408, gnl|loxAfr1|scaffold_80 (261390-261281) | |
| 279-408, gnl|mm7|chr2 (91791059-91790964) | |
| 279-408, gnl|mm7|chr2 (91791070-91790961) | |
| 279-408, gnl|Mm7|chr2 (91791064-91790937) | |
| 279-408, gnl|monDom2|scaffold_971 (11102-11303) | |
| 279-408, gnl|monDom2|scaffold_971 (11199-11311) | |
| 279-408, gnl|oryCun1|scaffold_187674 (47437-47348) | |
| 279-408, gnl|oryCun1|scaffold_187674 (47429-47345) | |
| 279-408, gnl|panTro1|chr9 (46860242-46860332) | |
| 279-408, gnl|panTro1|chr9 (46860228-46860340) | |
| 279-408, gnl|rheMac2|chr14 (25754867-25754772) | |
| 279-408, gnl|rheMac2|chr14 (25754881-25754769) | |
| 279-408, gnl|rn3|chr3 (76216604-76216509) | |
| 279-408, gnl|rn3|chr3 (76216615-76216506) | |
| 279-408, gnl|tetNig1|chr13 (11260265-11260357) | |
| 279-408, gnl|tetNig1|chr13 (11260245-11260363) | |
| 279-408, gnl|xenTro1|scaffold_76 (1892768-1892855) | |
| 279-408, gnl|xenTro1|scaffold_76 (1892752-1892862) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |