Non-Coding RNA Search

reep33c_i16.y1

Sequence:


               
               CTTATTTAGAGAAATTCTGTGATTTATTTTGTAGAACAAAGACTTAAGTTTTTAATTTCA
TTTGTTATATAAATCTAGAGATCCTAGTTTTGCTTAAAAGTGAGGCACAGCATACTTTCC
ACTTCACTGTCTGCTTTGCACTTAGGCATGGAACTAAGTTATACAGTCTGATTTAGGTAA
TCAGATTCACTCCCATTGGTATAGTGCTCCAACCTCCATTTTTGCAAAGGAAAATTAAAT
TCTGAAGAACTTTGGCTTGATGAAAATGTTATTTTTTTCCTTTAATACCCAGTTGTAAGT
TTATTTTACATTTACAACATTATAAATTCTGGTATAATATAGAGTGAATGAGGAGTTCCC
ATCATAGCTCAGCAGTAATGAACCCGACTGGAATCTATGAGGACACAGGTTCAATCCTTG
GCCTTGAACAGTGGGTCAGGGATCTGGCATTGCCATGAGCTGTGATGTAGGTTCGTGTGG
CTTGGATCCTGCATTGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATTTAGAGAAATTCTGTGATTTATTTTGTAGAACAAAGACTTAAGTTTTTAATTTCA
TTTGTTATATAAATCTAGAGATCCTAGTTTTGCTTAAAAGTGAGGCACAGCATACTTTCC
ACTTCACTGTCTGCTTTGCACTTAGGCATGGAACTAAGTTATACAGTCTGATTTAGGTAA
TCAGATTCACTCCCATTGGTATAGTGCTCCAACCTCCATTTTTGCAAAGGAAAATTAAAT
TCTGAAGAACTTTGGCTTGATGAAAATGTTATTTTTTTCCTTTAATACCCAGTTGTAAGT
TTATTTTACATTTACAACATTATAAATTCTGGTATAATATAGAGTGAATGAGGAGTTCCC
ATCATAGCTCAGCAGTAATGAACCCGACTGGAATCTATGAGGACACAGGTTCAATCCTTG
GCCTTGAACAGTGGGTCAGGGATCTGGCATTGCCATGAGCTGTGATGTAGGTTCGTGTGG
CTTGGATCCTGCATTGCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-322, gnl|bosTau2|chr4 (12968677-12969005)
               

               
               2-322, gnl|Hg17|chr7 (86460926-86461222)
               

               
               2-322, gnl|Mm7|chr5 (9165316-9165017)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-322, gnl|bosTau2|chr4 (12968677-12969005)
               

               
               2-322, gnl|Hg17|chr7 (86460926-86461222)
               

               
               2-322, gnl|Mm7|chr5 (9165316-9165017)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	2-322, gnl\|bosTau2\|chr4 (12968677-12969005)
	2-322, gnl\|Hg17\|chr7 (86460926-86461222)
	2-322, gnl\|Mm7\|chr5 (9165316-9165017)