Non-Coding RNA Search

reep33c_j14.y1

Sequence:


               
               AAGAAATTGAGAAAGAGAGTGAAGACACCAGTTTGCGTCAGGAGACACAGAGGCGGACAT
CCAACCATGGTCATGCCAGGAAAAGAGCCAAGTCTAATTCCAAGCTGAAGTTGGTGCGCA
GCCTTGCAGTGTGTGAGGAATCTTCTGCCCCATTTACTGATGGGCCACTAGAAACCCAGG
ATATAATTCAGTTGCACATCAGCTGCCCCTCTGACAAGGAGGAAGAAAAGTCCACAAAGG
ATGTCTCTGAGAAGGAAGACAAGGACAAAAACAAAGAAAAAGTCCCAAGGAAGATGCTGT
CTAGAGACTCCAGCCAAGAATATACGGACTCCACTGGAATAGACCTACATGAATTTCTTG
TAAATACACTGAAAAAGAACCCAAGGGACAGAATGATGCTGCTAAAATTAGAACAGGAGA
TTCTGGAATTTATTAATGACAACAACAACCAGTTCAAGAAGTTCCCTCAGATGACCTCAT
ATCACCGGATGCTATTACACCGGGTAGCTGCCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAATTGAGAAAGAGAGTGAAGACACCAGTTTGCGTCAGGAGACACAGAGGCGGACAT
CCAACCATGGTCATGCCAGGAAAAGAGCCAAGTCTAATTCCAAGCTGAAGTTGGTGCGCA
GCCTTGCAGTGTGTGAGGAATCTTCTGCCCCATTTACTGATGGGCCACTAGAAACCCAGG
ATATAATTCAGTTGCACATCAGCTGCCCCTCTGACAAGGAGGAAGAAAAGTCCACAAAGG
ATGTCTCTGAGAAGGAAGACAAGGACAAAAACAAAGAAAAAGTCCCAAGGAAGATGCTGT
CTAGAGACTCCAGCCAAGAATATACGGACTCCACTGGAATAGACCTACATGAATTTCTTG
TAAATACACTGAAAAAGAACCCAAGGGACAGAATGATGCTGCTAAAATTAGAACAGGAGA
TTCTGGAATTTATTAATGACAACAACAACCAGTTCAAGAAGTTCCCTCAGATGACCTCAT
ATCACCGGATGCTATTACACCGGGTAGCTGCCTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55638309|ref|XP_509160.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55638309|ref|XP_509160.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               175-306, gnl|bosTau2|chr5 (35000056-35000187)
               

               
               175-306, gnl|Hg17|chr12 (55979531-55979402)
               

               
               175-306, gnl|Mm7|chr10 (126956019-126956150)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               175-306, gnl|bosTau2|chr5 (35000056-35000187)
               

               
               175-306, gnl|Hg17|chr12 (55979531-55979402)
               

               
               175-306, gnl|Mm7|chr10 (126956019-126956150)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	175-306, gnl\|bosTau2\|chr5 (35000056-35000187)
	175-306, gnl\|Hg17\|chr12 (55979531-55979402)
	175-306, gnl\|Mm7\|chr10 (126956019-126956150)