Non-Coding RNA Search

reep34c_g13.y1

Sequence:


               
               CAgggtaatgaacccagctagtatccatgaaaatgtgggttcgatctctggccctactca
gtgggtaaatgatctggtgttgctgtggctgtggccggcagctgtagctgcgatttgacc
ccgagcccgggaacgtccatgtgcccctggtgctgccctgaaaagaaacaaaaTTCATAA
TACATTTAAAATAAGATTTTTAAAAATTCATACCTCAGATGCTACAGGACTATGTTCAGA
TAGTTTCCTTATTTTAAAGAACTATTTAAAGTAGGTGAGCTGCAAAAGGCTCACCTACTT
TAAATAGTATTTCGAGGCTGTCCTTTGAGTTGCTCTAAATAGTAGCCCTAGTGCCATTAT
AGATGAACCCCACATTCTCTCCAAATGAAACCAAGCCCATGTTTGTACTCCTAGGCTCAG
GCTCTTCTCCATTGGCATGGTGTTCATCAGTTTTGCAGCAGAAGTGGGCAGCCCACCAAG
AAGAATATGGCTGGCAGCAAGCGCGTGTGCCCTTCCAATGAGATCATCTATTATCCACAG
ATGGCTCCTGTGGTGATCACTCTGGTGTCAGATGGGACTCGCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAgggtaatgaacccagctagtatccatgaaaatgtgggttcgatctctggccctactca
gtgggtaaatgatctggtgttgctgtggctgtggccggcagctgtagctgcgatttgacc
ccgagcccgggaacgtccatgtgcccctggtgctgccctgaaaagaaacaaaaTTCATAA
TACATTTAAAATAAGATTTTTAAAAATTCATACCTCAGATGCTACAGGACTATGTTCAGA
TAGTTTCCTTATTTTAAAGAACTATTTAAAGTAGGTGAGCTGCAAAAGGCTCACCTACTT
TAAATAGTATTTCGAGGCTGTCCTTTGAGTTGCTCTAAATAGTAGCCCTAGTGCCATTAT
AGATGAACCCCACATTCTCTCCAAATGAAACCAAGCCCATGTTTGTACTCCTAGGCTCAG
GCTCTTCTCCATTGGCATGGTGTTCATCAGTTTTGCAGCAGAAGTGGGCAGCCCACCAAG
AAGAATATGGCTGGCAGCAAGCGCGTGTGCCCTTCCAATGAGATCATCTATTATCCACAG
ATGGCTCCTGTGGTGATCACTCTGGTGTCAGATGGGACTCGCTGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|4099535|gb|AAD00649.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|4099535|gb|AAD00649.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               166-540, gnl|bosTau2|chr28 (22427736-22428108)
               

               
               166-540, gnl|Hg17|chr10 (74554634-74555007)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               166-540, gnl|bosTau2|chr28 (22427736-22428108)
               

               
               166-540, gnl|Hg17|chr10 (74554634-74555007)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	166-540, gnl\|bosTau2\|chr28 (22427736-22428108)
	166-540, gnl\|Hg17\|chr10 (74554634-74555007)