Non-Coding RNA Search

reep34c_i2.y1

Sequence:


               
               AGGCCCGCGGCCTGGGGCTGCTTTCAGCCTGGCCTCTGTGTCAAGGCCGGGCCCGTGGGT
CCCCCCAACTACAGTGAAGGAACGTTGCCCTATTCCTACAACCTGTGCGTTGCCCACACT
GGAAAGACAGAGTTTAATTTTCTGACATGTAGTGAGCCGTTGAGTTCAGGACAAGACATA
CTTTGTGCTGAGTCACCTGGGGCCTTATTTCCACTTCAGAGTGGGAATGATTTGACTTCA
CATCCTGAGACCCTGACACCGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCC
CAGAGACCCGGCACCAGCGGCTCCCAGAATGGCGATGAAACCGGCACCTGGCCCAACAAC
CAGTTTGACACGGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCCGCTGAC
GGGAGCTCCACCCTGGGAGGGGGCGCCGGCACCATGGGCTTGAGTGCCCGCTACGGGCCC
CAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAACGTCTACGTCCCGGGCAGCAAC
GCCACTCTGACCAACGCGGCTGCCAAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCCCGCGGCCTGGGGCTGCTTTCAGCCTGGCCTCTGTGTCAAGGCCGGGCCCGTGGGT
CCCCCCAACTACAGTGAAGGAACGTTGCCCTATTCCTACAACCTGTGCGTTGCCCACACT
GGAAAGACAGAGTTTAATTTTCTGACATGTAGTGAGCCGTTGAGTTCAGGACAAGACATA
CTTTGTGCTGAGTCACCTGGGGCCTTATTTCCACTTCAGAGTGGGAATGATTTGACTTCA
CATCCTGAGACCCTGACACCGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCC
CAGAGACCCGGCACCAGCGGCTCCCAGAATGGCGATGAAACCGGCACCTGGCCCAACAAC
CAGTTTGACACGGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCCGCTGAC
GGGAGCTCCACCCTGGGAGGGGGCGCCGGCACCATGGGCTTGAGTGCCCGCTACGGGCCC
CAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAACGTCTACGTCCCGGGCAGCAAC
GCCACTCTGACCAACGCGGCTGCCAAGCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|22164096|gb|AAM93555.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|22164096|gb|AAM93555.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-261, gnl|bosTau2|chr7 (35230965-35231225)
               

               
               1-261, gnl|Hg17|chr5 (140770111-140770371)
               

               
               1-261, gnl|Mm7|chr18 (38120599-38120859)
               


               
               386-569, gnl|bosTau2|chr7 (35336078-35336262)
               

               
               386-569, gnl|Hg17|chr5 (140870669-140870857)
               

               
               386-569, gnl|Mm7|chr18 (38216084-38216266)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-261, gnl|bosTau2|chr7 (35230965-35231225)
               

               
               1-261, gnl|Hg17|chr5 (140770111-140770371)
               

               
               1-261, gnl|Mm7|chr18 (38120599-38120859)
               


               
               386-569, gnl|bosTau2|chr7 (35336078-35336262)
               

               
               386-569, gnl|Hg17|chr5 (140870669-140870857)
               

               
               386-569, gnl|Mm7|chr18 (38216084-38216266)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-261, gnl\|bosTau2\|chr7 (35230965-35231225)
	1-261, gnl\|Hg17\|chr5 (140770111-140770371)
	1-261, gnl\|Mm7\|chr18 (38120599-38120859)

	386-569, gnl\|bosTau2\|chr7 (35336078-35336262)
	386-569, gnl\|Hg17\|chr5 (140870669-140870857)
	386-569, gnl\|Mm7\|chr18 (38216084-38216266)