Non-Coding RNA Search

reje07b_m17.y1

Sequence:


               
               GCTTTTTATACATTTAGGATATTATCCCTTTGTTGTACTTGCAATGTACATCTTGCCCCA
TTTGTTGTTTGCATTTTGCTCGTTTGTAAAGTTTTCTGACACAGATGTTTTTAAGTTTTT
ATGTAGTTTGTAAATATATAAATTTATTGCTTATTCCCTTTGTCATTCTTTCCATTATTT
TTATACTTGTTTGGTTTATTATTAATGTTATTATAAACAACTTTGGTAAAAAGAACTGTA
TAGTATACTGGTTGCCACCTCTAGTAAATGTATACATGTTATAATTATTATTTCTTATGC
TTTTTAATATATTATTTCAAATAAACATTTTTATTGATTGTTATATTTCAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTTTATACATTTAGGATATTATCCCTTTGTTGTACTTGCAATGTACATCTTGCCCCA
TTTGTTGTTTGCATTTTGCTCGTTTGTAAAGTTTTCTGACACAGATGTTTTTAAGTTTTT
ATGTAGTTTGTAAATATATAAATTTATTGCTTATTCCCTTTGTCATTCTTTCCATTATTT
TTATACTTGTTTGGTTTATTATTAATGTTATTATAAACAACTTTGGTAAAAAGAACTGTA
TAGTATACTGGTTGCCACCTCTAGTAAATGTATACATGTTATAATTATTATTTCTTATGC
TTTTTAATATATTATTTCAAATAAACATTTTTATTGATTGTTATATTTCAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 8 entry(ies)

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Aligned organism(s): 8 entry(ies)

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               2-341, gnl|bosTau2|chr10 (7908825-7909169)
               

               
               2-341, gnl|canFam2|chr8 (31880307-31880637)
               

               
               2-341, gnl|dasNov1|scaffold_12013 (22610-22952)
               

               
               2-341, gnl|hg17|chr14 (52195257-52195596)
               

               
               2-341, gnl|Hg17|chr14 (52195625-52195286)
               

               
               2-341, gnl|loxAfr1|scaffold_9696 (37542-37854)
               

               
               2-341, gnl|panTro1|chr15_random (10617105-10617443)
               

               
               2-341, gnl|rheMac2|chr7 (115614650-115614987)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-341, gnl|bosTau2|chr10 (7908825-7909169)
               

               
               2-341, gnl|canFam2|chr8 (31880307-31880637)
               

               
               2-341, gnl|dasNov1|scaffold_12013 (22610-22952)
               

               
               2-341, gnl|hg17|chr14 (52195257-52195596)
               

               
               2-341, gnl|Hg17|chr14 (52195625-52195286)
               

               
               2-341, gnl|loxAfr1|scaffold_9696 (37542-37854)
               

               
               2-341, gnl|panTro1|chr15_random (10617105-10617443)
               

               
               2-341, gnl|rheMac2|chr7 (115614650-115614987)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	2-341, gnl\|bosTau2\|chr10 (7908825-7909169)
	2-341, gnl\|canFam2\|chr8 (31880307-31880637)
	2-341, gnl\|dasNov1\|scaffold_12013 (22610-22952)
	2-341, gnl\|hg17\|chr14 (52195257-52195596)
	2-341, gnl\|Hg17\|chr14 (52195625-52195286)
	2-341, gnl\|loxAfr1\|scaffold_9696 (37542-37854)
	2-341, gnl\|panTro1\|chr15_random (10617105-10617443)
	2-341, gnl\|rheMac2\|chr7 (115614650-115614987)