Non-Coding RNA Search

reje09b_a16.y1

Sequence:


               
               CTCTGCAGAGGTCACAGGAGGCGGGGGCCGAGCACGCGTCCTCGGTGGCAGCTGGAGTGG
CAGCTGCGGGTTTGTGGAGCCCCCGTAATCCCCAAGGGCAAGGGGAGCGCGTGGCGGACC
AAAGAGGGCCAGTGAGCGGTCGTGCGCCCACCAATAGGTGCGGGGCTCGGAGACGCCCAG
CCTGCGCGGTCCCTCCCTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTGCAGAGGTCACAGGAGGCGGGGGCCGAGCACGCGTCCTCGGTGGCAGCTGGAGTGG
CAGCTGCGGGTTTGTGGAGCCCCCGTAATCCCCAAGGGCAAGGGGAGCGCGTGGCGGACC
AAAGAGGGCCAGTGAGCGGTCGTGCGCCCACCAATAGGTGCGGGGCTCGGAGACGCCCAG
CCTGCGCGGTCCCTCCCTCCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q29255_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q29255_PIG

Aligned organism(s): 11 entry(ies)

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Aligned organism(s): 11 entry(ies)

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               2-202, gnl|bosTau2|chr16 (22892533-22892741)
               

               
               2-202, gnl|canFam2|chr7 (32454204-32454018)
               

               
               2-202, gnl|dasNov1|scaffold_51305 (7430-7616)
               

               
               2-202, gnl|echTel1|scaffold_282412 (43999-44164)
               

               
               2-202, gnl|hg17|chr1 (165807309-165807497)
               

               
               2-202, gnl|Hg17|chr1 (165807309-165807506)
               

               
               2-202, gnl|mm7|chr1 (164423916-164423752)
               

               
               2-202, gnl|monDom2|scaffold_16 (20224617-20224807)
               

               
               2-202, gnl|panTro1|chr1 (148072741-148072910)
               

               
               2-202, gnl|rheMac2|chr1 (198839608-198839796)
               

               
               2-202, gnl|rn3|chr13 (80249027-80248864)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-202, gnl|bosTau2|chr16 (22892533-22892741)
               

               
               2-202, gnl|canFam2|chr7 (32454204-32454018)
               

               
               2-202, gnl|dasNov1|scaffold_51305 (7430-7616)
               

               
               2-202, gnl|echTel1|scaffold_282412 (43999-44164)
               

               
               2-202, gnl|hg17|chr1 (165807309-165807497)
               

               
               2-202, gnl|Hg17|chr1 (165807309-165807506)
               

               
               2-202, gnl|mm7|chr1 (164423916-164423752)
               

               
               2-202, gnl|monDom2|scaffold_16 (20224617-20224807)
               

               
               2-202, gnl|panTro1|chr1 (148072741-148072910)
               

               
               2-202, gnl|rheMac2|chr1 (198839608-198839796)
               

               
               2-202, gnl|rn3|chr13 (80249027-80248864)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	2-202, gnl\|bosTau2\|chr16 (22892533-22892741)
	2-202, gnl\|canFam2\|chr7 (32454204-32454018)
	2-202, gnl\|dasNov1\|scaffold_51305 (7430-7616)
	2-202, gnl\|echTel1\|scaffold_282412 (43999-44164)
	2-202, gnl\|hg17\|chr1 (165807309-165807497)
	2-202, gnl\|Hg17\|chr1 (165807309-165807506)
	2-202, gnl\|mm7\|chr1 (164423916-164423752)
	2-202, gnl\|monDom2\|scaffold_16 (20224617-20224807)
	2-202, gnl\|panTro1\|chr1 (148072741-148072910)
	2-202, gnl\|rheMac2\|chr1 (198839608-198839796)
	2-202, gnl\|rn3\|chr13 (80249027-80248864)