Non-Coding RNA Search

reje10b_n8.y1

Sequence:


               
               GGGGCAAATCAGGAGTCAGAGCTCCAGCCCGGGTGTCCTGACTCCCTGGCCTCCTGGCTC
TGGCTCATCGTTTCTCTCACTTTGTCCAGAAGGGCTCTCTGGCTCCCTCCTTTCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGCAAATCAGGAGTCAGAGCTCCAGCCCGGGTGTCCTGACTCCCTGGCCTCCTGGCTC
TGGCTCATCGTTTCTCTCACTTTGTCCAGAAGGGCTCTCTGGCTCCCTCCTTTCCTCC

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               13-118, gnl|bosTau2|chr23 (23866676-23866781)
               

               
               13-118, gnl|canFam2|chr35 (29410475-29410616)
               

               
               13-118, gnl|hg17|chr6 (30271036-30271183)
               

               
               13-118, gnl|Hg17|chr6 (30271201-30271109)
               

               
               13-118, gnl|loxAfr1|scaffold_126143 (5532-5380)
               

               
               13-118, gnl|mm7|chr17 (35005622-35005485)
               

               
               13-118, gnl|oryCun1|scaffold_68400 (119-4)
               

               
               13-118, gnl|panTro1|chr5 (30759053-30759200)
               

               
               13-118, gnl|rheMac2|chr4 (29795695-29795840)
               

               
               13-118, gnl|rn3|chr20 (1808189-1808332)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-118, gnl|bosTau2|chr23 (23866676-23866781)
               

               
               13-118, gnl|canFam2|chr35 (29410475-29410616)
               

               
               13-118, gnl|hg17|chr6 (30271036-30271183)
               

               
               13-118, gnl|Hg17|chr6 (30271201-30271109)
               

               
               13-118, gnl|loxAfr1|scaffold_126143 (5532-5380)
               

               
               13-118, gnl|mm7|chr17 (35005622-35005485)
               

               
               13-118, gnl|oryCun1|scaffold_68400 (119-4)
               

               
               13-118, gnl|panTro1|chr5 (30759053-30759200)
               

               
               13-118, gnl|rheMac2|chr4 (29795695-29795840)
               

               
               13-118, gnl|rn3|chr20 (1808189-1808332)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	13-118, gnl\|bosTau2\|chr23 (23866676-23866781)
	13-118, gnl\|canFam2\|chr35 (29410475-29410616)
	13-118, gnl\|hg17\|chr6 (30271036-30271183)
	13-118, gnl\|Hg17\|chr6 (30271201-30271109)
	13-118, gnl\|loxAfr1\|scaffold_126143 (5532-5380)
	13-118, gnl\|mm7\|chr17 (35005622-35005485)
	13-118, gnl\|oryCun1\|scaffold_68400 (119-4)
	13-118, gnl\|panTro1\|chr5 (30759053-30759200)
	13-118, gnl\|rheMac2\|chr4 (29795695-29795840)
	13-118, gnl\|rn3\|chr20 (1808189-1808332)